As shown in Figure here, the Liver cancer miRNA expression is compared with Stomach cancer miRNA expression (LIHC_vs_STAD). One can see the high expression of miR-122-5p in liver cancer tissue (T: 22825.9). miR-122 is a well known liver miRNA.

Download miRNA comparison datasets

Please click the following agv files to download desired datasets and
use iTune to sync the datasets to RNA-Seq Viewers APP.

Compare different TCGA cancers with ..

BLADDER UROTHELIAL CARCINOMA =>    vsBLCA.agv

BREAST INVASIVE CARCINOMA =>    vsBRCA.agv

COLON ADENOCARCINOMA =>    vsCOAD.agv

HEAD AND NECK SQUAMOUS CELL CARCINOMA =>    vsHNSC.agv

KIDNEY CHROMOPHOBE =>    vsKICH.agv

KIDNEY RENAL CLEAR CELL CARCINOMA =>    vsKIRC.agv

KIDNEY RENAL PAPILLARY CELL CARCINOMA =>    vsKIRP.agv

LIVER HEPATOCELLULAR CARCINOMA =>    vsLIHC.agv

LUNG ADENOCARCINOMA =>    vsLUAD.agv

LUNG SQUAMOUS CELL CARCINOMA =>    vsLUSC.agv

PROSTATE ADENOCARCINOMA =>    vsPRAD.agv

RECTUM ADENOCARCINOMA =>   vsREAD.agv

STOMACH ADENOCARCINOMA =>    vsSTAD.agv

THYROID CARCINOMA =>    vsTHCA.agv

UTERINE CORPUS ENDOMETRIAL CARCINOMA =>    vsUCEC.agv

We have generated specific datasets to compare the miRNA expression difference between various cancer types.

We used the average expression level of all tumor samples for each cancer types. Comparison libraries are generated to use one cancer type as background value (N) and all others as tumors value (T).