PRIMER_SEQUENCE_ID=NM_002344 SEQUENCE=AGGTGGGCGTGGCCAGACCAGCTTTAGGTCCGGGGAGTGTCTCGCCAGCGGCAGCACACCCCTGTAAGTGGTGGCCAGGGCTGCCGTGGCAAAATGAGCTGTCAACTTTAGGTTGACAGGGGTGTGGCCGCGACCGCAAGGGCTTTTGTTGCCGGGTGGACCCAACAGGGATGGGCTGCTGGGGACAGCTGCTGGTGTGGTTCGGAGCCGCGGGCGCCATTCTCTGCTCTAGCCCGGGGTCCCAGGAGACTTTTCTGCGGTCCTCGCCCCTGCCGCTGGCAAGTCCCAGCCCCCGGGACCCGAAAGTCAGCGCCCCGCCTAGTATCTTGGAGCCAGCCTCCCCGCTGAATTCTCCGGGCACCGAGGGGTCTTGGCTGTTTTCTACCTGCGGGGCCAGCGGCCGGCATGGGCCCACACAGACACAATGTGACGGGGCGTACGCGGGGACCAGCGTGGTGGTGACCGTGGGGGCCGCCGGGCAGCTGAGAGGCGTGCAGCTGTGGCGCGTGCCGGGCCCTGGCCAGTATCTGATCTCAGCCTACGGAGCCGCGGGCGGCAAAGGCGCCAAGAACCACCTGTCGCGGGCGCATGGCGTCTTCGTCTCAGCAATCTTCTCCCTCGGTCTCGGGGAGTCGCTGTACATCCTGGTGGGGCAGCAGGGAGAGGACGCCTGTCCCGGAGGTAGCCCGGAGAGCCAGCTCGTCTGCCTCGGGGAGTCTCGAGCCGTTGAAGAGCACGCGGCGATGGATGGGAGCGAAGGGGTCCCGGGGTCGCGGCGCTGGGCGGGAGGTGGCGGGGGTGGCGGGGGCGCCACCTACGTTTTCCGGTTGCGCGCTGGCGAGCTGGAACCGTTGCTGGTGGCGGCCGGAGGCGGCGGTCGGGCCTACCTGAGGCCGCGGGACCGAGGCCGGACTCAGGCCTCCCCCGAGAAACTGGAGAACCGCTCGGAGGCGCCCGGGAGCGGCGGGAGAGGCGGGGCGGCAGGGGGCGACGCTTCAGAGACTGACAACCTCTGGGCTGATGGGGAAGATGGAGTATCCTTCATACACCCCAGCAGCGAGCTCTTCCTGCAGCCTCTGGCAGTCACCGAGAACCACGGAGAGGTAGAGATCCGAAGGCACCTCAACTGCAGTCACTGCCCTTTGAGAGACTGCCAATGGCAGGCAGAGCTCCAGCTGGCTGAATGCCTGTGCCCAGAAGGCATGGAGCTAGCTGTGGATAACGTCACCTGCATGGACCTGCACAAGCCCCCAGGCCCTCTGGTTCTGATGGTGGCTGTGGTGGCAACCTCAACACTGAGCCTCCTTATGGTGTGTGGGGTCCTGATTCTGGTGAAGCAGAAGAAGTGGCAGGGCCTGCAGGAGATGAGGCTGCCGAGCCCTGAGCTTGAGCTGAGCAAGCTTCGAACCTCTGCCATCAGGACAGCCCCCAATCCCTATTATTGCCAGGTGGGGCTTGGCCCGGCCCAGTCCTGGCCTCTGCCACCAGGTGTCACCGAGGTTTCCCCAGCCAATGTTACTCTGCTCAGAGCCCTGGGCCATGGTGCCTTTGGGGAGGTGTATGAGGGACTGGTAATTGGCCTTCCTGGGGACTCCAGTCCCCTGCAGGTAGCTATCAAGACCCTGCCAGAACTCTGCTCGCCTCAGGATGAGCTGGATTTCCTCATGGAGGCCCTCATCATCAGCAAGTTTCGCCATCAGAACATTGTGCGGTGTGTGGGGCTCAGCCTCAGGGCCACCCCTCGCCTCATTCTGCTGGAACTGATGTCTGGAGGGGACATGAAGAGTTTCCTGAGGCACAGTCGGCCACACCTGGGCCAGCCATCACCTCTGGTCATGCGGGACCTGCTGCAACTGGCCCAGGACATAGCCCAGGGCTGCCACTACCTGGAGGAAAATCACTTCATCCACAGGGATATTGCCGCCCGGAACTGCCTGCTGAGCTGCGCTGGACCCAGCCGAGTGGCCAAGATTGGGGACTTTGGGATGGCACGAGATATCTACCGGGCCAGTTATTACCGCAGGGGGGACCGGGCCTTGCTCCCAGTCAAGTGGATGCCCCCAGAGGCCTTCCTGGAGGGCATCTTCACATCCAAGACAGATTCCTGGTCTTTTGGGGTGCTGCTCTGGGAGATCTTCTCACTGGGCTACATGCCCTATCCTGGGCGCACCAACCAGGAGGTGCTGGACTTCGTCGTTGGAGGAGGCCGGATGGACCCTCCTAGGGGCTGCCCAGGGCCTGTGTACCGCATCATGACCCAGTGTTGGCAGCACGAGCCTGAGCTCCGCCCTAGCTTTGCCAGCATCTTGGAGCGTCTGCAGTACTGCACTCAGGACCCGGATGTGCTGAATTCACTCCTGCCAATGGAGCTGGGGCCCACCCCAGAGGAGGAAGGGACTTCTGGGCTGGGGAACAGATCTTTGGAGTGCCTAAGACCCCCACAGCCCCAGGAACTGAGTCCAGAGAAGTTGAAAAGCTGGGGAGGTAGCCCTCTTGGCCCCTGGCTGTCCTCTGGCCTCAAGCCCCTCAAATCCAGGGGCCTCCAACCTCAGAACCTTTGGAATCCCACTTATCGCTCCTGAGCCCCAAGGGGCCCTGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTTCCCTGCAGTCTGTGCTGTGTGTCTGGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGCCTCCCAGGGAAGGGCCCAGCCACTTCCAGCTTTTGATCTTGGGGCCAGAGGCCGCCTTACACACACCCCAGGTGTCCATGGGGAGCACTGGATTGCTTTCCCATTATGAGCGTCCTTCATCTGGGCAGACCCCCCACCCTGCAGATGCTTCTAATAAAAGGCTCTTCTCATCCTCC PRIMER_OPT_SIZE=23 PRIMER_MIN_SIZE=15 PRIMER_MAX_SIZE=26 PRIMER_MISPRIMING_LIBRARY=Human_rep_in_fasta.txt PRIMER_NUM_RETURN=20 PRIMER_NUM_NS_ACCEPTED=1 PRIMER_PRODUCT_SIZE_RANGE=100-999 PRIMER_EXPLAIN_FLAG=1 PRIMER_LEFT_EXPLAIN=considered 33960, GC content failed 2153, low tm 5987, high tm 20117, high any compl 6, high end compl 48, high repeat similarity 46, long poly-x seq 21, ok 5582 PRIMER_RIGHT_EXPLAIN=considered 33789, GC content failed 2137, low tm 6231, high tm 19665, high end compl 16, high repeat similarity 9, long poly-x seq 42, ok 5689 PRIMER_PAIR_EXPLAIN=considered 480, unacceptable product size 418, high any compl 9, high end compl 6, ok 47 PRIMER_PAIR_PENALTY=0.0788 PRIMER_LEFT_PENALTY=0.009608 PRIMER_RIGHT_PENALTY=0.069179 PRIMER_LEFT_SEQUENCE=GAGGAAAATCACTTCATCCACAG PRIMER_RIGHT_SEQUENCE=GATAAGTGGGATTCCAAAGGTTC PRIMER_LEFT=1889,23 PRIMER_RIGHT=2573,23 PRIMER_LEFT_TM=59.990 PRIMER_RIGHT_TM=60.069 PRIMER_LEFT_GC_PERCENT=43.478 PRIMER_RIGHT_GC_PERCENT=43.478 PRIMER_LEFT_SELF_ANY=4.00 PRIMER_RIGHT_SELF_ANY=6.00 PRIMER_LEFT_SELF_END=1.00 PRIMER_RIGHT_SELF_END=1.00 PRIMER_LEFT_MISPRIMING_SCORE=11.00, HSATI Human satellite I DNA HinfI fragment PRIMER_RIGHT_MISPRIMING_SCORE=10.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_PAIR_MISPRIMING_SCORE=20.00, HSATI Human satellite I DNA HinfI fragment PRIMER_LEFT_END_STABILITY=6.7000 PRIMER_RIGHT_END_STABILITY=7.9000 PRIMER_PAIR_COMPL_ANY=7.00 PRIMER_PAIR_COMPL_END=1.00 PRIMER_PRODUCT_SIZE=685 PRIMER_PAIR_PENALTY_1=0.1532 PRIMER_LEFT_1_PENALTY=0.143622 PRIMER_RIGHT_1_PENALTY=0.009608 PRIMER_LEFT_1_SEQUENCE=GAGAACCACGGAGAGGTAGAGAT PRIMER_RIGHT_1_SEQUENCE=CTGTGGATGAAGTGATTTTCCTC PRIMER_LEFT_1=1088,23 PRIMER_RIGHT_1=1911,23 PRIMER_LEFT_1_TM=60.144 PRIMER_RIGHT_1_TM=59.990 PRIMER_LEFT_1_GC_PERCENT=52.174 PRIMER_RIGHT_1_GC_PERCENT=43.478 PRIMER_LEFT_1_SELF_ANY=3.00 PRIMER_RIGHT_1_SELF_ANY=4.00 PRIMER_LEFT_1_SELF_END=2.00 PRIMER_RIGHT_1_SELF_END=3.00 PRIMER_LEFT_1_MISPRIMING_SCORE=11.00, reverse Tigger1 Autonomous DNA transposon PRIMER_RIGHT_1_MISPRIMING_SCORE=11.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_1_MISPRIMING_SCORE=21.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_1_END_STABILITY=6.3000 PRIMER_RIGHT_1_END_STABILITY=7.9000 PRIMER_PAIR_1_COMPL_ANY=5.00 PRIMER_PAIR_1_COMPL_END=3.00 PRIMER_PRODUCT_SIZE_1=824 PRIMER_PAIR_PENALTY_2=0.2199 PRIMER_LEFT_2_PENALTY=0.150712 PRIMER_RIGHT_2_PENALTY=0.069179 PRIMER_LEFT_2_SEQUENCE=CAAGACAGATTCCTGGTCTTTTG PRIMER_RIGHT_2_SEQUENCE=GATAAGTGGGATTCCAAAGGTTC PRIMER_LEFT_2=2092,23 PRIMER_RIGHT_2=2573,23 PRIMER_LEFT_2_TM=60.151 PRIMER_RIGHT_2_TM=60.069 PRIMER_LEFT_2_GC_PERCENT=43.478 PRIMER_RIGHT_2_GC_PERCENT=43.478 PRIMER_LEFT_2_SELF_ANY=7.00 PRIMER_RIGHT_2_SELF_ANY=6.00 PRIMER_LEFT_2_SELF_END=3.00 PRIMER_RIGHT_2_SELF_END=1.00 PRIMER_LEFT_2_MISPRIMING_SCORE=12.00, reverse MLT1R MLT1-Mammalian LTR retrotransposon internal sequence - a consensus PRIMER_RIGHT_2_MISPRIMING_SCORE=10.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_PAIR_2_MISPRIMING_SCORE=21.00, reverse MLT1R MLT1-Mammalian LTR retrotransposon internal sequence - a consensus PRIMER_LEFT_2_END_STABILITY=7.6000 PRIMER_RIGHT_2_END_STABILITY=7.9000 PRIMER_PAIR_2_COMPL_ANY=4.00 PRIMER_PAIR_2_COMPL_END=3.00 PRIMER_PRODUCT_SIZE_2=482 PRIMER_PAIR_PENALTY_3=0.3519 PRIMER_LEFT_3_PENALTY=0.282673 PRIMER_RIGHT_3_PENALTY=0.069179 PRIMER_LEFT_3_SEQUENCE=AAATCACTTCATCCACAGGGATA PRIMER_RIGHT_3_SEQUENCE=GATAAGTGGGATTCCAAAGGTTC PRIMER_LEFT_3=1894,23 PRIMER_RIGHT_3=2573,23 PRIMER_LEFT_3_TM=59.717 PRIMER_RIGHT_3_TM=60.069 PRIMER_LEFT_3_GC_PERCENT=39.130 PRIMER_RIGHT_3_GC_PERCENT=43.478 PRIMER_LEFT_3_SELF_ANY=5.00 PRIMER_RIGHT_3_SELF_ANY=6.00 PRIMER_LEFT_3_SELF_END=3.00 PRIMER_RIGHT_3_SELF_END=1.00 PRIMER_LEFT_3_MISPRIMING_SCORE=12.00, MER4A a consensus PRIMER_RIGHT_3_MISPRIMING_SCORE=10.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_PAIR_3_MISPRIMING_SCORE=21.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_LEFT_3_END_STABILITY=7.1000 PRIMER_RIGHT_3_END_STABILITY=7.9000 PRIMER_PAIR_3_COMPL_ANY=6.00 PRIMER_PAIR_3_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_3=680 PRIMER_PAIR_PENALTY_4=0.3649 PRIMER_LEFT_4_PENALTY=0.355258 PRIMER_RIGHT_4_PENALTY=0.009608 PRIMER_LEFT_4_SEQUENCE=GGTGTATGAGGGACTGGTAATTG PRIMER_RIGHT_4_SEQUENCE=CTGTGGATGAAGTGATTTTCCTC PRIMER_LEFT_4=1555,23 PRIMER_RIGHT_4=1911,23 PRIMER_LEFT_4_TM=59.645 PRIMER_RIGHT_4_TM=59.990 PRIMER_LEFT_4_GC_PERCENT=47.826 PRIMER_RIGHT_4_GC_PERCENT=43.478 PRIMER_LEFT_4_SELF_ANY=4.00 PRIMER_RIGHT_4_SELF_ANY=4.00 PRIMER_LEFT_4_SELF_END=2.00 PRIMER_RIGHT_4_SELF_END=3.00 PRIMER_LEFT_4_MISPRIMING_SCORE=12.00, reverse HSATI Human satellite I DNA HinfI fragment PRIMER_RIGHT_4_MISPRIMING_SCORE=11.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_4_MISPRIMING_SCORE=22.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_4_END_STABILITY=7.2000 PRIMER_RIGHT_4_END_STABILITY=7.9000 PRIMER_PAIR_4_COMPL_ANY=4.00 PRIMER_PAIR_4_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_4=357 PRIMER_PAIR_PENALTY_5=0.3800 PRIMER_LEFT_5_PENALTY=0.009608 PRIMER_RIGHT_5_PENALTY=0.370420 PRIMER_LEFT_5_SEQUENCE=GAGGAAAATCACTTCATCCACAG PRIMER_RIGHT_5_SEQUENCE=AGGAATCTGTCTTGGATGTGAAG PRIMER_LEFT_5=1889,23 PRIMER_RIGHT_5=2105,23 PRIMER_LEFT_5_TM=59.990 PRIMER_RIGHT_5_TM=59.630 PRIMER_LEFT_5_GC_PERCENT=43.478 PRIMER_RIGHT_5_GC_PERCENT=43.478 PRIMER_LEFT_5_SELF_ANY=4.00 PRIMER_RIGHT_5_SELF_ANY=3.00 PRIMER_LEFT_5_SELF_END=1.00 PRIMER_RIGHT_5_SELF_END=0.00 PRIMER_LEFT_5_MISPRIMING_SCORE=11.00, HSATI Human satellite I DNA HinfI fragment PRIMER_RIGHT_5_MISPRIMING_SCORE=12.00, reverse SVA Composite retroposon PRIMER_PAIR_5_MISPRIMING_SCORE=22.00, HSATI Human satellite I DNA HinfI fragment PRIMER_LEFT_5_END_STABILITY=6.7000 PRIMER_RIGHT_5_END_STABILITY=7.0000 PRIMER_PAIR_5_COMPL_ANY=6.00 PRIMER_PAIR_5_COMPL_END=3.00 PRIMER_PRODUCT_SIZE_5=217 PRIMER_PAIR_PENALTY_6=0.4263 PRIMER_LEFT_6_PENALTY=0.143622 PRIMER_RIGHT_6_PENALTY=0.282673 PRIMER_LEFT_6_SEQUENCE=GAGAACCACGGAGAGGTAGAGAT PRIMER_RIGHT_6_SEQUENCE=TATCCCTGTGGATGAAGTGATTT PRIMER_LEFT_6=1088,23 PRIMER_RIGHT_6=1916,23 PRIMER_LEFT_6_TM=60.144 PRIMER_RIGHT_6_TM=59.717 PRIMER_LEFT_6_GC_PERCENT=52.174 PRIMER_RIGHT_6_GC_PERCENT=39.130 PRIMER_LEFT_6_SELF_ANY=3.00 PRIMER_RIGHT_6_SELF_ANY=5.00 PRIMER_LEFT_6_SELF_END=2.00 PRIMER_RIGHT_6_SELF_END=3.00 PRIMER_LEFT_6_MISPRIMING_SCORE=11.00, reverse Tigger1 Autonomous DNA transposon PRIMER_RIGHT_6_MISPRIMING_SCORE=12.00, MER4A a consensus PRIMER_PAIR_6_MISPRIMING_SCORE=20.00, reverse LTR13 LTR from a putative human endogenous retrovirus PRIMER_LEFT_6_END_STABILITY=6.3000 PRIMER_RIGHT_6_END_STABILITY=6.9000 PRIMER_PAIR_6_COMPL_ANY=5.00 PRIMER_PAIR_6_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_6=829 PRIMER_PAIR_PENALTY_7=0.4296 PRIMER_LEFT_7_PENALTY=0.360461 PRIMER_RIGHT_7_PENALTY=0.069179 PRIMER_LEFT_7_SEQUENCE=CTACCTGGAGGAAAATCACTTCA PRIMER_RIGHT_7_SEQUENCE=GATAAGTGGGATTCCAAAGGTTC PRIMER_LEFT_7=1882,23 PRIMER_RIGHT_7=2573,23 PRIMER_LEFT_7_TM=59.640 PRIMER_RIGHT_7_TM=60.069 PRIMER_LEFT_7_GC_PERCENT=43.478 PRIMER_RIGHT_7_GC_PERCENT=43.478 PRIMER_LEFT_7_SELF_ANY=4.00 PRIMER_RIGHT_7_SELF_ANY=6.00 PRIMER_LEFT_7_SELF_END=3.00 PRIMER_RIGHT_7_SELF_END=1.00 PRIMER_LEFT_7_MISPRIMING_SCORE=12.00, L1PB1 3'-end of L1 repeat (subfamily L1PB1) - a consensus sequence PRIMER_RIGHT_7_MISPRIMING_SCORE=10.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_PAIR_7_MISPRIMING_SCORE=20.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_7_END_STABILITY=7.0000 PRIMER_RIGHT_7_END_STABILITY=7.9000 PRIMER_PAIR_7_COMPL_ANY=6.00 PRIMER_PAIR_7_COMPL_END=3.00 PRIMER_PRODUCT_SIZE_7=692 PRIMER_PAIR_PENALTY_8=0.4396 PRIMER_LEFT_8_PENALTY=0.370420 PRIMER_RIGHT_8_PENALTY=0.069179 PRIMER_LEFT_8_SEQUENCE=CTTCACATCCAAGACAGATTCCT PRIMER_RIGHT_8_SEQUENCE=GATAAGTGGGATTCCAAAGGTTC PRIMER_LEFT_8=2083,23 PRIMER_RIGHT_8=2573,23 PRIMER_LEFT_8_TM=59.630 PRIMER_RIGHT_8_TM=60.069 PRIMER_LEFT_8_GC_PERCENT=43.478 PRIMER_RIGHT_8_GC_PERCENT=43.478 PRIMER_LEFT_8_SELF_ANY=3.00 PRIMER_RIGHT_8_SELF_ANY=6.00 PRIMER_LEFT_8_SELF_END=1.00 PRIMER_RIGHT_8_SELF_END=1.00 PRIMER_LEFT_8_MISPRIMING_SCORE=12.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_8_MISPRIMING_SCORE=10.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_PAIR_8_MISPRIMING_SCORE=22.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_8_END_STABILITY=8.2000 PRIMER_RIGHT_8_END_STABILITY=7.9000 PRIMER_PAIR_8_COMPL_ANY=4.00 PRIMER_PAIR_8_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_8=491 PRIMER_PAIR_PENALTY_9=0.4864 PRIMER_LEFT_9_PENALTY=0.342747 PRIMER_RIGHT_9_PENALTY=0.143622 PRIMER_LEFT_9_SEQUENCE=GTCTTCGTCTCAGCAATCTTCTC PRIMER_RIGHT_9_SEQUENCE=GATCTCTACCTCTCCGTGGTTCT PRIMER_LEFT_9=593,23 PRIMER_RIGHT_9=1111,23 PRIMER_LEFT_9_TM=59.657 PRIMER_RIGHT_9_TM=60.144 PRIMER_LEFT_9_GC_PERCENT=47.826 PRIMER_RIGHT_9_GC_PERCENT=52.174 PRIMER_LEFT_9_SELF_ANY=3.00 PRIMER_RIGHT_9_SELF_ANY=4.00 PRIMER_LEFT_9_SELF_END=0.00 PRIMER_RIGHT_9_SELF_END=0.00 PRIMER_LEFT_9_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_9_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_9_MISPRIMING_SCORE=24.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_9_END_STABILITY=6.7000 PRIMER_RIGHT_9_END_STABILITY=6.4000 PRIMER_PAIR_9_COMPL_ANY=3.00 PRIMER_PAIR_9_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_9=519 PRIMER_PAIR_PENALTY_10=0.4989 PRIMER_LEFT_10_PENALTY=0.143622 PRIMER_RIGHT_10_PENALTY=0.355258 PRIMER_LEFT_10_SEQUENCE=GAGAACCACGGAGAGGTAGAGAT PRIMER_RIGHT_10_SEQUENCE=CAATTACCAGTCCCTCATACACC PRIMER_LEFT_10=1088,23 PRIMER_RIGHT_10=1577,23 PRIMER_LEFT_10_TM=60.144 PRIMER_RIGHT_10_TM=59.645 PRIMER_LEFT_10_GC_PERCENT=52.174 PRIMER_RIGHT_10_GC_PERCENT=47.826 PRIMER_LEFT_10_SELF_ANY=3.00 PRIMER_RIGHT_10_SELF_ANY=4.00 PRIMER_LEFT_10_SELF_END=2.00 PRIMER_RIGHT_10_SELF_END=0.00 PRIMER_LEFT_10_MISPRIMING_SCORE=11.00, reverse Tigger1 Autonomous DNA transposon PRIMER_RIGHT_10_MISPRIMING_SCORE=12.00, reverse HSATI Human satellite I DNA HinfI fragment PRIMER_PAIR_10_MISPRIMING_SCORE=21.00, MER4C a consensus PRIMER_LEFT_10_END_STABILITY=6.3000 PRIMER_RIGHT_10_END_STABILITY=7.6000 PRIMER_PAIR_10_COMPL_ANY=5.00 PRIMER_PAIR_10_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_10=490 PRIMER_PAIR_PENALTY_11=0.5041 PRIMER_LEFT_11_PENALTY=0.143622 PRIMER_RIGHT_11_PENALTY=0.360461 PRIMER_LEFT_11_SEQUENCE=GAGAACCACGGAGAGGTAGAGAT PRIMER_RIGHT_11_SEQUENCE=TGAAGTGATTTTCCTCCAGGTAG PRIMER_LEFT_11=1088,23 PRIMER_RIGHT_11=1904,23 PRIMER_LEFT_11_TM=60.144 PRIMER_RIGHT_11_TM=59.640 PRIMER_LEFT_11_GC_PERCENT=52.174 PRIMER_RIGHT_11_GC_PERCENT=43.478 PRIMER_LEFT_11_SELF_ANY=3.00 PRIMER_RIGHT_11_SELF_ANY=4.00 PRIMER_LEFT_11_SELF_END=2.00 PRIMER_RIGHT_11_SELF_END=3.00 PRIMER_LEFT_11_MISPRIMING_SCORE=11.00, reverse Tigger1 Autonomous DNA transposon PRIMER_RIGHT_11_MISPRIMING_SCORE=12.00, L1PB1 3'-end of L1 repeat (subfamily L1PB1) - a consensus sequence PRIMER_PAIR_11_MISPRIMING_SCORE=21.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_11_END_STABILITY=6.3000 PRIMER_RIGHT_11_END_STABILITY=6.9000 PRIMER_PAIR_11_COMPL_ANY=5.00 PRIMER_PAIR_11_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_11=817 PRIMER_PAIR_PENALTY_12=0.5070 PRIMER_LEFT_12_PENALTY=0.437796 PRIMER_RIGHT_12_PENALTY=0.069179 PRIMER_LEFT_12_SEQUENCE=TATCTACCGGGCCAGTTATTACC PRIMER_RIGHT_12_SEQUENCE=GATAAGTGGGATTCCAAAGGTTC PRIMER_LEFT_12=1996,23 PRIMER_RIGHT_12=2573,23 PRIMER_LEFT_12_TM=60.438 PRIMER_RIGHT_12_TM=60.069 PRIMER_LEFT_12_GC_PERCENT=47.826 PRIMER_RIGHT_12_GC_PERCENT=43.478 PRIMER_LEFT_12_SELF_ANY=6.00 PRIMER_RIGHT_12_SELF_ANY=6.00 PRIMER_LEFT_12_SELF_END=3.00 PRIMER_RIGHT_12_SELF_END=1.00 PRIMER_LEFT_12_MISPRIMING_SCORE=11.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_12_MISPRIMING_SCORE=10.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_PAIR_12_MISPRIMING_SCORE=21.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_12_END_STABILITY=7.2000 PRIMER_RIGHT_12_END_STABILITY=7.9000 PRIMER_PAIR_12_COMPL_ANY=6.00 PRIMER_PAIR_12_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_12=578 PRIMER_PAIR_PENALTY_13=0.5595 PRIMER_LEFT_13_PENALTY=0.490313 PRIMER_RIGHT_13_PENALTY=0.069179 PRIMER_LEFT_13_SEQUENCE=TCTTCACATCCAAGACAGATTCC PRIMER_RIGHT_13_SEQUENCE=GATAAGTGGGATTCCAAAGGTTC PRIMER_LEFT_13=2082,23 PRIMER_RIGHT_13=2573,23 PRIMER_LEFT_13_TM=60.490 PRIMER_RIGHT_13_TM=60.069 PRIMER_LEFT_13_GC_PERCENT=43.478 PRIMER_RIGHT_13_GC_PERCENT=43.478 PRIMER_LEFT_13_SELF_ANY=4.00 PRIMER_RIGHT_13_SELF_ANY=6.00 PRIMER_LEFT_13_SELF_END=1.00 PRIMER_RIGHT_13_SELF_END=1.00 PRIMER_LEFT_13_MISPRIMING_SCORE=11.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_13_MISPRIMING_SCORE=10.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_PAIR_13_MISPRIMING_SCORE=21.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_13_END_STABILITY=8.1000 PRIMER_RIGHT_13_END_STABILITY=7.9000 PRIMER_PAIR_13_COMPL_ANY=4.00 PRIMER_PAIR_13_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_13=492 PRIMER_PAIR_PENALTY_14=0.6379 PRIMER_LEFT_14_PENALTY=0.355258 PRIMER_RIGHT_14_PENALTY=0.282673 PRIMER_LEFT_14_SEQUENCE=GGTGTATGAGGGACTGGTAATTG PRIMER_RIGHT_14_SEQUENCE=TATCCCTGTGGATGAAGTGATTT PRIMER_LEFT_14=1555,23 PRIMER_RIGHT_14=1916,23 PRIMER_LEFT_14_TM=59.645 PRIMER_RIGHT_14_TM=59.717 PRIMER_LEFT_14_GC_PERCENT=47.826 PRIMER_RIGHT_14_GC_PERCENT=39.130 PRIMER_LEFT_14_SELF_ANY=4.00 PRIMER_RIGHT_14_SELF_ANY=5.00 PRIMER_LEFT_14_SELF_END=2.00 PRIMER_RIGHT_14_SELF_END=3.00 PRIMER_LEFT_14_MISPRIMING_SCORE=12.00, reverse HSATI Human satellite I DNA HinfI fragment PRIMER_RIGHT_14_MISPRIMING_SCORE=12.00, MER4A a consensus PRIMER_PAIR_14_MISPRIMING_SCORE=22.00, reverse HSATI Human satellite I DNA HinfI fragment PRIMER_LEFT_14_END_STABILITY=7.2000 PRIMER_RIGHT_14_END_STABILITY=6.9000 PRIMER_PAIR_14_COMPL_ANY=5.00 PRIMER_PAIR_14_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_14=362 PRIMER_PAIR_PENALTY_15=0.6531 PRIMER_LEFT_15_PENALTY=0.282673 PRIMER_RIGHT_15_PENALTY=0.370420 PRIMER_LEFT_15_SEQUENCE=AAATCACTTCATCCACAGGGATA PRIMER_RIGHT_15_SEQUENCE=AGGAATCTGTCTTGGATGTGAAG PRIMER_LEFT_15=1894,23 PRIMER_RIGHT_15=2105,23 PRIMER_LEFT_15_TM=59.717 PRIMER_RIGHT_15_TM=59.630 PRIMER_LEFT_15_GC_PERCENT=39.130 PRIMER_RIGHT_15_GC_PERCENT=43.478 PRIMER_LEFT_15_SELF_ANY=5.00 PRIMER_RIGHT_15_SELF_ANY=3.00 PRIMER_LEFT_15_SELF_END=3.00 PRIMER_RIGHT_15_SELF_END=0.00 PRIMER_LEFT_15_MISPRIMING_SCORE=12.00, MER4A a consensus PRIMER_RIGHT_15_MISPRIMING_SCORE=12.00, reverse SVA Composite retroposon PRIMER_PAIR_15_MISPRIMING_SCORE=23.00, HSATI Human satellite I DNA HinfI fragment PRIMER_LEFT_15_END_STABILITY=7.1000 PRIMER_RIGHT_15_END_STABILITY=7.0000 PRIMER_PAIR_15_COMPL_ANY=6.00 PRIMER_PAIR_15_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_15=212 PRIMER_PAIR_PENALTY_16=0.6781 PRIMER_LEFT_16_PENALTY=0.322859 PRIMER_RIGHT_16_PENALTY=0.355258 PRIMER_LEFT_16_SEQUENCE=ATGGAGTATCCTTCATACACCCC PRIMER_RIGHT_16_SEQUENCE=CAATTACCAGTCCCTCATACACC PRIMER_LEFT_16=1029,23 PRIMER_RIGHT_16=1577,23 PRIMER_LEFT_16_TM=60.323 PRIMER_RIGHT_16_TM=59.645 PRIMER_LEFT_16_GC_PERCENT=47.826 PRIMER_RIGHT_16_GC_PERCENT=47.826 PRIMER_LEFT_16_SELF_ANY=8.00 PRIMER_RIGHT_16_SELF_ANY=4.00 PRIMER_LEFT_16_SELF_END=1.00 PRIMER_RIGHT_16_SELF_END=0.00 PRIMER_LEFT_16_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_16_MISPRIMING_SCORE=12.00, reverse HSATI Human satellite I DNA HinfI fragment PRIMER_PAIR_16_MISPRIMING_SCORE=22.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_16_END_STABILITY=10.6000 PRIMER_RIGHT_16_END_STABILITY=7.6000 PRIMER_PAIR_16_COMPL_ANY=5.00 PRIMER_PAIR_16_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_16=549 PRIMER_PAIR_PENALTY_17=0.6833 PRIMER_LEFT_17_PENALTY=0.322859 PRIMER_RIGHT_17_PENALTY=0.360461 PRIMER_LEFT_17_SEQUENCE=ATGGAGTATCCTTCATACACCCC PRIMER_RIGHT_17_SEQUENCE=TGAAGTGATTTTCCTCCAGGTAG PRIMER_LEFT_17=1029,23 PRIMER_RIGHT_17=1904,23 PRIMER_LEFT_17_TM=60.323 PRIMER_RIGHT_17_TM=59.640 PRIMER_LEFT_17_GC_PERCENT=47.826 PRIMER_RIGHT_17_GC_PERCENT=43.478 PRIMER_LEFT_17_SELF_ANY=8.00 PRIMER_RIGHT_17_SELF_ANY=4.00 PRIMER_LEFT_17_SELF_END=1.00 PRIMER_RIGHT_17_SELF_END=3.00 PRIMER_LEFT_17_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_17_MISPRIMING_SCORE=12.00, L1PB1 3'-end of L1 repeat (subfamily L1PB1) - a consensus sequence PRIMER_PAIR_17_MISPRIMING_SCORE=23.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_17_END_STABILITY=10.6000 PRIMER_RIGHT_17_END_STABILITY=6.9000 PRIMER_PAIR_17_COMPL_ANY=7.00 PRIMER_PAIR_17_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_17=876 PRIMER_PAIR_PENALTY_18=0.6850 PRIMER_LEFT_18_PENALTY=0.143622 PRIMER_RIGHT_18_PENALTY=0.541428 PRIMER_LEFT_18_SEQUENCE=GAGAACCACGGAGAGGTAGAGAT PRIMER_RIGHT_18_SEQUENCE=ATAAGGAGGCTCAGTGTTGAGGT PRIMER_LEFT_18=1088,23 PRIMER_RIGHT_18=1308,23 PRIMER_LEFT_18_TM=60.144 PRIMER_RIGHT_18_TM=60.541 PRIMER_LEFT_18_GC_PERCENT=52.174 PRIMER_RIGHT_18_GC_PERCENT=47.826 PRIMER_LEFT_18_SELF_ANY=3.00 PRIMER_RIGHT_18_SELF_ANY=5.00 PRIMER_LEFT_18_SELF_END=2.00 PRIMER_RIGHT_18_SELF_END=0.00 PRIMER_LEFT_18_MISPRIMING_SCORE=11.00, reverse Tigger1 Autonomous DNA transposon PRIMER_RIGHT_18_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_18_MISPRIMING_SCORE=22.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_18_END_STABILITY=6.3000 PRIMER_RIGHT_18_END_STABILITY=7.6000 PRIMER_PAIR_18_COMPL_ANY=5.00 PRIMER_PAIR_18_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_18=221 PRIMER_PAIR_PENALTY_19=0.6980 PRIMER_LEFT_19_PENALTY=0.342747 PRIMER_RIGHT_19_PENALTY=0.355258 PRIMER_LEFT_19_SEQUENCE=GTCTTCGTCTCAGCAATCTTCTC PRIMER_RIGHT_19_SEQUENCE=CAATTACCAGTCCCTCATACACC PRIMER_LEFT_19=593,23 PRIMER_RIGHT_19=1577,23 PRIMER_LEFT_19_TM=59.657 PRIMER_RIGHT_19_TM=59.645 PRIMER_LEFT_19_GC_PERCENT=47.826 PRIMER_RIGHT_19_GC_PERCENT=47.826 PRIMER_LEFT_19_SELF_ANY=3.00 PRIMER_RIGHT_19_SELF_ANY=4.00 PRIMER_LEFT_19_SELF_END=0.00 PRIMER_RIGHT_19_SELF_END=0.00 PRIMER_LEFT_19_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_19_MISPRIMING_SCORE=12.00, reverse HSATI Human satellite I DNA HinfI fragment PRIMER_PAIR_19_MISPRIMING_SCORE=22.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_19_END_STABILITY=6.7000 PRIMER_RIGHT_19_END_STABILITY=7.6000 PRIMER_PAIR_19_COMPL_ANY=3.00 PRIMER_PAIR_19_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_19=985 =