PRIMER_SEQUENCE_ID=NM_003331 SEQUENCE=GACGCGGGCGCGGAAGGAGCGCGGCCGGAGGTCCTCAGGAAGAAGCCGCGGGGACTGGCTGCGCTTGACAGGCTGCACTTGGATGGGAGCACCTGGTGCCTCGGGACTGCTCCGATGCCCGGGTCTGTGCTGAATGTGTAATATGCGGAACTATATTGAAACATTACAACCATCTTTTGATGGCAACACCCTGAGGACCTCCCTTTTCCAGATGGGGAAACTGAGGCCCAGAATTGCTAAGTGGCTTGCTTGAGTTGACACAGGGAGCTCCAGGACTCACCCTCAGCTGAGCCACCTGCCGGGAGCATGCCTCTGCGCCACTGGGGGATGGCCAGGGGCAGTAAGCCCGTTGGGGATGGAGCCCAGCCCATGGCTGCCATGGGAGGCCTGAAGGTGCTTCTGCACTGGGCTGGTCCAGGCGGCGGGGAGCCCTGGGTCACTTTCAGTGAGTCATCGCTGACAGCTGAGGAAGTCTGCATCCACATTGCACATAAAGTTGGTATCACTCCTCCTTGCTTCAATCTCTTTGCCCTCTTCGATGCTCAGGCCCAAGTCTGGTTGCCCCCAAACCACATCCTAGAGATCCCCAGAGATGCAAGCCTGATGCTATATTTCCGCATAAGGTTTTATTTCCGGAACTGGCATGGCATGAATCCTCGGGAACCGGCTGTGTACCGTTGTGGGCCCCCAGGAACCGAGGCATCCTCAGATCAGACAGCACAGGGGATGCAACTCCTGGACCCAGCCTCATTTGAGTACCTCTTTGAGCAGGGCAAGCATGAGTTTGTGAATGACGTGGCATCACTGTGGGAGCTGTCGACCGAGGAGGAGATCCACCACTTTAAGAATGAGAGCCTGGGCATGGCCTTTCTGCACCTCTGTCACCTCGCTCTCCGCCATGGCATCCCCCTGGAGGAGGTGGCCAAGAAGACCAGCTTCAAGGACTGCATCCCGCGCTCCTTCCGCCGGCATATCCGGCAGCACAGCGCCCTGACCCGGCTGCGCCTTCGGAACGTCTTCCGCAGGTTCCTGCGGGACTTCCAGCCGGGCCGACTCTCCCAGCAGATGGTCATGGTCAAATACCTAGCCACACTCGAGCGGCTGGCACCCCGCTTCGGCACAGAGCGTGTGCCCGTGTGCCACCTGAGGCTGCTGGCCCAGGCCGAGGGGGAGCCCTGCTACATCCGGGACAGTGGGGTGGCCCCTACAGACCCTGGCCCTGAGTCTGCTGCTGGGCCCCCAACCCACGAGGTGCTGGTGACAGGCACTGGTGGCATCCAGTGGTGGCCAGTAGAGGAGGAGGTGAACAAGGAGGAGGGTTCTAGTGGCAGCAGTGGCAGGAACCCCCAAGCCAGCCTGTTTGGGAAGAAGGCCAAGGCTCACAAGGCATTCGGCCAGCCGGCAGACAGGCCGCGGGAGCCACTGTGGGCCTACTTCTGTGACTTCCGGGACATCACCCACGTGGTGCTGAAAGAGCACTGTGTCAGCATCCACCGGCAGGACAACAAGTGCCTGGAGCTGAGCTTGCCTTCCCGGGCTGCGGCGCTGTCCTTCGTGTCGCTGGTGGACGGCTATTTCCGCCTGACGGCCGACTCCAGCCACTACCTGTGCCACGAGGTGGCTCCCCCACGGCTGGTGATGAGCATCCGGGATGGGATCCACGGACCCCTGCTGGAGCCATTTGTGCAGGCCAAGCTGCGGCCCGAGGACGGCCTGTACCTCATTCACTGGAGCACCAGCCACCCCTACCGCCTGATCCTCACAGTGGCCCAGCGTAGCCAGGCACCAGACGGCATGCAGAGCTTGCGGCTCCGAAAGTTCCCCATTGAGCAGCAGGACGGGGCCTTCGTGCTGGAGGGCTGGGGCCGGTCCTTCCCCAGCGTTCGGGAACTTGGGGCTGCCTTGCAGGGCTGCTTGCTGAGGGCCGGGGATGACTGCTTCTCTCTGCGTCGCTGTTGCCTGCCCCAACCAGGAGAAACCTCCAATCTCATCATCATGCGGGGGGCTCGGGCCAGCCCCAGGACACTCAACCTCAGCCAGCTCAGCTTCCACCGGGTTGACCAGAAGGAGATCACCCAGCTGTCCCACTTGGGCCAGGGCACAAGGACCAACGTGTATGAGGGCCGCCTGCGAGTGGAGGGCAGCGGGGACCCTGAGGAGGGCAAGATGGATGACGAGGACCCCCTCGTGCCTGGCAGGGACCGTGGGCAGGAGCTACGAGTGGTGCTCAAAGTGCTGGACCCTAGTCACCATGACATCGCCCTGGCCTTCTACGAGACAGCCAGCCTCATGAGCCAGGTCTCCCACACGCACCTGGCCTTCGTGCATGGCGTCTGTGTGCGCGGCCCTGAAAATAGCATGGTGACAGAGTACGTGGAGCACGGACCCCTGGATGTGTGGCTGCGGAGGGAGCGGGGCCATGTGCCCATGGCTTGGAAGATGGTGGTGGCCCAGCAGCTGGCCAGCGCCCTCAGCTACCTGGAGAACAAGAACCTGGTTCATGGTAATGTGTGTGGCCGGAACATCCTGCTGGCCCGGCTGGGGTTGGCAGAGGGCACCAGCCCCTTCATCAAGCTGAGTGATCCTGGCGTGGGCCTGGGCGCCCTCTCCAGGGAGGAGCGGGTGGAGAGGATCCCCTGGCTGGCCCCCGAATGCCTACCAGGTGGGGCCAACAGCCTAAGCACCGCCATGGACAAGTGGGGGTTTGGCGCCACCCTCCTGGAGATCTGCTTTGACGGAGAGGCCCCTCTGCAGAGCCGCAGTCCCTCCGAGAAGGAGCATTTCTACCAGAGGCAGCACCGGCTGCCCGAGCCCTCCTGCCCACAGCTGGCCACACTCACCAGCCAGTGTCTGACCTATGAGCCAACCCAGAGGCCATCATTCCGCACCATCCTGCGTGACCTCACCCGCGTGCAGCCCCACAATCTTGCTGACGTCTTGACTGTGAACCGGGACTCACCGGCCGTCGGACCTACTACTTTCCACAAGCGCTATTTGAAAAAGATCCGAGATCTGGGCGAGGGTCACTTCGGCAAGGTCAGCTTGTACTGCTACGATCCGACCAACGACGGCACTGGCGAGATGGTGGCGGTGAAAGCCCTCAAGGCAGACTGCGGCCCCCAGCACCGCTCGGGCTGGAAGCAGGAGATTGACATTCTGCGCACGCTCTACCACGAGCACATCATCAAGTACAAGGGCTGCTGCGAGGACCAAGGCGAGAAGTCGCTGCAGCTGGTCATGGAGTACGTGCCCCTGGGCAGCCTCCGAGACTACCTGCCCCGGCACAGCATCGGGCTGGCCCAGCTGCTGCTCTTCGCCCAGCAGATCTGCGAGGGCATGGCCTATCTGCACGCGCACGACTACATCCACCGAGACCTAGCCGCGCGCAACGTGCTGCTGGACAACGACAGGCTGGTCAAGATCGGGGACTTTGGCCTAGCCAAGGCCGTGCCCGAAGGCCACGAGTACTACCGCGTGCGCGAGGATGGGGACAGCCCCGTGTTCTGGTATGCCCCAGAGTGCCTGAAGGAGTATAAGTTCTACTATGCGTCAGATGTCTGGTCCTTCGGGGTGACCCTGTATGAGCTGCTGACGCACTGTGACTCCAGCCAGAGCCCCCCCACGAAATTCCTTGAGCTCATAGGCATTGCTCAGGGTCAGATGACAGTTCTGAGACTCACTGAGTTGCTGGAACGAGGGGAGAGGCTGCCACGGCCCGACAAATGTCCCTGTGAGGTCTATCATCTCATGAAGAACTGCTGGGAGACAGAGGCGTCCTTTCGCCCAACCTTCGAGAACCTCATACCCATTCTGAAGACAGTCCATGAGAAGTACCAAGGCCAGGCCCCTTCAGTGTTCAGCGTGTGCTGAGGCACAATGGCAGCCCTGCCTGGGAGGACTGGACCAGGCAGTGGCTGCAGAGGGAGCCTCCTGCTCCCTGCTCCAGGATGAAACCAAGAGGGGGATGTCAGCCTCACCCACACCGTGTGCCTTACTCCTGTCTAGAGACCCCACCTCTGTGAACTTATTTTTCTTTCTTGGCCGTGAGCCTAACCATGATCTTGAGGGACCCAACATTTGTAGGGGCACTAATCCAGCCCTTAAATCCCCCAGCTTCCAAACTTGAGGCCCACCATCTCCACCATCTGGTAATAAACTCATGTTTTCTCTGCTGGG PRIMER_OPT_SIZE=23 PRIMER_MIN_SIZE=15 PRIMER_MAX_SIZE=26 PRIMER_MISPRIMING_LIBRARY=Human_rep_in_fasta.txt PRIMER_NUM_RETURN=20 PRIMER_NUM_NS_ACCEPTED=1 PRIMER_PRODUCT_SIZE_RANGE=100-999 PRIMER_EXPLAIN_FLAG=1 PRIMER_LEFT_EXPLAIN=considered 48641, GC content failed 1182, low tm 9822, high tm 29051, high any compl 17, high end compl 21, high repeat similarity 32, long poly-x seq 37, ok 8479 PRIMER_RIGHT_EXPLAIN=considered 48629, GC content failed 1026, low tm 10126, high tm 28781, high any compl 5, high end compl 6, high repeat similarity 13, long poly-x seq 39, ok 8633 PRIMER_PAIR_EXPLAIN=considered 829, unacceptable product size 758, high end compl 6, ok 65 PRIMER_PAIR_PENALTY=0.0979 PRIMER_LEFT_PENALTY=0.016074 PRIMER_RIGHT_PENALTY=0.081865 PRIMER_LEFT_SEQUENCE=AACTTATTTTTCTTTCTTGGCCG PRIMER_RIGHT_SEQUENCE=TTATTACCAGATGGTGGAGATGG PRIMER_LEFT=4021,23 PRIMER_RIGHT=4154,23 PRIMER_LEFT_TM=60.016 PRIMER_RIGHT_TM=60.082 PRIMER_LEFT_GC_PERCENT=34.783 PRIMER_RIGHT_GC_PERCENT=43.478 PRIMER_LEFT_SELF_ANY=4.00 PRIMER_RIGHT_SELF_ANY=6.00 PRIMER_LEFT_SELF_END=2.00 PRIMER_RIGHT_SELF_END=0.00 PRIMER_LEFT_MISPRIMING_SCORE=12.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_MISPRIMING_SCORE=12.00, reverse L1MB3 3'-end of L1 repeat (subfamily L1MB3) - a consensus sequence PRIMER_PAIR_MISPRIMING_SCORE=21.00, reverse L1MA2 3'-end of L1 repeat (subfamily L1MA2) - a consensus sequence PRIMER_LEFT_END_STABILITY=12.9000 PRIMER_RIGHT_END_STABILITY=8.1000 PRIMER_PAIR_COMPL_ANY=3.00 PRIMER_PAIR_COMPL_END=1.00 PRIMER_PRODUCT_SIZE=134 PRIMER_PAIR_PENALTY_1=0.1310 PRIMER_LEFT_1_PENALTY=0.008837 PRIMER_RIGHT_1_PENALTY=0.122120 PRIMER_LEFT_1_SEQUENCE=TGTCCCTGTGAGGTCTATCATCT PRIMER_RIGHT_1_SEQUENCE=TGGACTGTCTTCAGAATGGGTAT PRIMER_LEFT_1=3723,23 PRIMER_RIGHT_1=3823,23 PRIMER_LEFT_1_TM=60.009 PRIMER_RIGHT_1_TM=59.878 PRIMER_LEFT_1_GC_PERCENT=47.826 PRIMER_RIGHT_1_GC_PERCENT=43.478 PRIMER_LEFT_1_SELF_ANY=3.00 PRIMER_RIGHT_1_SELF_ANY=5.00 PRIMER_LEFT_1_SELF_END=0.00 PRIMER_RIGHT_1_SELF_END=2.00 PRIMER_LEFT_1_MISPRIMING_SCORE=12.00, MER11B a consensus PRIMER_RIGHT_1_MISPRIMING_SCORE=12.00, L1MA5 3'-end of L1 repeat (subfamily L1MA5) - a consensus sequence PRIMER_PAIR_1_MISPRIMING_SCORE=23.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_1_END_STABILITY=6.6000 PRIMER_RIGHT_1_END_STABILITY=6.8000 PRIMER_PAIR_1_COMPL_ANY=4.00 PRIMER_PAIR_1_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_1=101 PRIMER_PAIR_PENALTY_2=0.1637 PRIMER_LEFT_2_PENALTY=0.008837 PRIMER_RIGHT_2_PENALTY=0.154904 PRIMER_LEFT_2_SEQUENCE=TGTCCCTGTGAGGTCTATCATCT PRIMER_RIGHT_2_SEQUENCE=AAATAAGTTCACAGAGGTGGGGT PRIMER_LEFT_2=3723,23 PRIMER_RIGHT_2=4029,23 PRIMER_LEFT_2_TM=60.009 PRIMER_RIGHT_2_TM=60.155 PRIMER_LEFT_2_GC_PERCENT=47.826 PRIMER_RIGHT_2_GC_PERCENT=43.478 PRIMER_LEFT_2_SELF_ANY=3.00 PRIMER_RIGHT_2_SELF_ANY=3.00 PRIMER_LEFT_2_SELF_END=0.00 PRIMER_RIGHT_2_SELF_END=0.00 PRIMER_LEFT_2_MISPRIMING_SCORE=12.00, MER11B a consensus PRIMER_RIGHT_2_MISPRIMING_SCORE=12.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_2_MISPRIMING_SCORE=24.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_2_END_STABILITY=6.6000 PRIMER_RIGHT_2_END_STABILITY=10.6000 PRIMER_PAIR_2_COMPL_ANY=6.00 PRIMER_PAIR_2_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_2=307 PRIMER_PAIR_PENALTY_3=0.2040 PRIMER_LEFT_3_PENALTY=0.122120 PRIMER_RIGHT_3_PENALTY=0.081865 PRIMER_LEFT_3_SEQUENCE=CAAATGTCCCTGTGAGGTCTATC PRIMER_RIGHT_3_SEQUENCE=TTATTACCAGATGGTGGAGATGG PRIMER_LEFT_3=3719,23 PRIMER_RIGHT_3=4154,23 PRIMER_LEFT_3_TM=59.878 PRIMER_RIGHT_3_TM=60.082 PRIMER_LEFT_3_GC_PERCENT=47.826 PRIMER_RIGHT_3_GC_PERCENT=43.478 PRIMER_LEFT_3_SELF_ANY=3.00 PRIMER_RIGHT_3_SELF_ANY=6.00 PRIMER_LEFT_3_SELF_END=0.00 PRIMER_RIGHT_3_SELF_END=0.00 PRIMER_LEFT_3_MISPRIMING_SCORE=12.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_3_MISPRIMING_SCORE=12.00, reverse L1MB3 3'-end of L1 repeat (subfamily L1MB3) - a consensus sequence PRIMER_PAIR_3_MISPRIMING_SCORE=21.00, HSATI Human satellite I DNA HinfI fragment PRIMER_LEFT_3_END_STABILITY=5.6000 PRIMER_RIGHT_3_END_STABILITY=8.1000 PRIMER_PAIR_3_COMPL_ANY=4.00 PRIMER_PAIR_3_COMPL_END=3.00 PRIMER_PRODUCT_SIZE_3=436 PRIMER_PAIR_PENALTY_4=0.2040 PRIMER_LEFT_4_PENALTY=0.122120 PRIMER_RIGHT_4_PENALTY=0.081865 PRIMER_LEFT_4_SEQUENCE=ATACCCATTCTGAAGACAGTCCA PRIMER_RIGHT_4_SEQUENCE=TTATTACCAGATGGTGGAGATGG PRIMER_LEFT_4=3801,23 PRIMER_RIGHT_4=4154,23 PRIMER_LEFT_4_TM=59.878 PRIMER_RIGHT_4_TM=60.082 PRIMER_LEFT_4_GC_PERCENT=43.478 PRIMER_RIGHT_4_GC_PERCENT=43.478 PRIMER_LEFT_4_SELF_ANY=5.00 PRIMER_RIGHT_4_SELF_ANY=6.00 PRIMER_LEFT_4_SELF_END=1.00 PRIMER_RIGHT_4_SELF_END=0.00 PRIMER_LEFT_4_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_4_MISPRIMING_SCORE=12.00, reverse L1MB3 3'-end of L1 repeat (subfamily L1MB3) - a consensus sequence PRIMER_PAIR_4_MISPRIMING_SCORE=21.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_4_END_STABILITY=7.9000 PRIMER_RIGHT_4_END_STABILITY=8.1000 PRIMER_PAIR_4_COMPL_ANY=5.00 PRIMER_PAIR_4_COMPL_END=3.00 PRIMER_PRODUCT_SIZE_4=354 PRIMER_PAIR_PENALTY_5=0.2082 PRIMER_LEFT_5_PENALTY=0.008837 PRIMER_RIGHT_5_PENALTY=0.199411 PRIMER_LEFT_5_SEQUENCE=TGTCCCTGTGAGGTCTATCATCT PRIMER_RIGHT_5_SEQUENCE=GGGTCTCTAGACAGGAGTAAGGC PRIMER_LEFT_5=3723,23 PRIMER_RIGHT_5=4010,23 PRIMER_LEFT_5_TM=60.009 PRIMER_RIGHT_5_TM=59.801 PRIMER_LEFT_5_GC_PERCENT=47.826 PRIMER_RIGHT_5_GC_PERCENT=56.522 PRIMER_LEFT_5_SELF_ANY=3.00 PRIMER_RIGHT_5_SELF_ANY=6.00 PRIMER_LEFT_5_SELF_END=0.00 PRIMER_RIGHT_5_SELF_END=2.00 PRIMER_LEFT_5_MISPRIMING_SCORE=12.00, MER11B a consensus PRIMER_RIGHT_5_MISPRIMING_SCORE=11.00, MER21B a consensus PRIMER_PAIR_5_MISPRIMING_SCORE=23.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_5_END_STABILITY=6.6000 PRIMER_RIGHT_5_END_STABILITY=9.7000 PRIMER_PAIR_5_COMPL_ANY=5.00 PRIMER_PAIR_5_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_5=288 PRIMER_PAIR_PENALTY_6=0.2154 PRIMER_LEFT_6_PENALTY=0.091943 PRIMER_RIGHT_6_PENALTY=0.123491 PRIMER_LEFT_6_SEQUENCE=ACTCCTCCTTGCTTCAATCTCTT PRIMER_RIGHT_6_SEQUENCE=AGGTATTTGACCATGACCATCTG PRIMER_LEFT_6=504,23 PRIMER_RIGHT_6=1084,23 PRIMER_LEFT_6_TM=59.908 PRIMER_RIGHT_6_TM=60.123 PRIMER_LEFT_6_GC_PERCENT=43.478 PRIMER_RIGHT_6_GC_PERCENT=43.478 PRIMER_LEFT_6_SELF_ANY=3.00 PRIMER_RIGHT_6_SELF_ANY=4.00 PRIMER_LEFT_6_SELF_END=0.00 PRIMER_RIGHT_6_SELF_END=2.00 PRIMER_LEFT_6_MISPRIMING_SCORE=12.00, MER11A a consensus PRIMER_RIGHT_6_MISPRIMING_SCORE=11.00, HSATI Human satellite I DNA HinfI fragment PRIMER_PAIR_6_MISPRIMING_SCORE=22.00, HSATI Human satellite I DNA HinfI fragment PRIMER_LEFT_6_END_STABILITY=6.7000 PRIMER_RIGHT_6_END_STABILITY=6.6000 PRIMER_PAIR_6_COMPL_ANY=4.00 PRIMER_PAIR_6_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_6=581 PRIMER_PAIR_PENALTY_7=0.2368 PRIMER_LEFT_7_PENALTY=0.154904 PRIMER_RIGHT_7_PENALTY=0.081865 PRIMER_LEFT_7_SEQUENCE=ACCCCACCTCTGTGAACTTATTT PRIMER_RIGHT_7_SEQUENCE=TTATTACCAGATGGTGGAGATGG PRIMER_LEFT_7=4007,23 PRIMER_RIGHT_7=4154,23 PRIMER_LEFT_7_TM=60.155 PRIMER_RIGHT_7_TM=60.082 PRIMER_LEFT_7_GC_PERCENT=43.478 PRIMER_RIGHT_7_GC_PERCENT=43.478 PRIMER_LEFT_7_SELF_ANY=3.00 PRIMER_RIGHT_7_SELF_ANY=6.00 PRIMER_LEFT_7_SELF_END=3.00 PRIMER_RIGHT_7_SELF_END=0.00 PRIMER_LEFT_7_MISPRIMING_SCORE=12.00, reverse MER34 a consensus PRIMER_RIGHT_7_MISPRIMING_SCORE=12.00, reverse L1MB3 3'-end of L1 repeat (subfamily L1MB3) - a consensus sequence PRIMER_PAIR_7_MISPRIMING_SCORE=22.00, HSATI Human satellite I DNA HinfI fragment PRIMER_LEFT_7_END_STABILITY=6.2000 PRIMER_RIGHT_7_END_STABILITY=8.1000 PRIMER_PAIR_7_COMPL_ANY=7.00 PRIMER_PAIR_7_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_7=148 PRIMER_PAIR_PENALTY_8=0.2442 PRIMER_LEFT_8_PENALTY=0.122120 PRIMER_RIGHT_8_PENALTY=0.122120 PRIMER_LEFT_8_SEQUENCE=CAAATGTCCCTGTGAGGTCTATC PRIMER_RIGHT_8_SEQUENCE=TGGACTGTCTTCAGAATGGGTAT PRIMER_LEFT_8=3719,23 PRIMER_RIGHT_8=3823,23 PRIMER_LEFT_8_TM=59.878 PRIMER_RIGHT_8_TM=59.878 PRIMER_LEFT_8_GC_PERCENT=47.826 PRIMER_RIGHT_8_GC_PERCENT=43.478 PRIMER_LEFT_8_SELF_ANY=3.00 PRIMER_RIGHT_8_SELF_ANY=5.00 PRIMER_LEFT_8_SELF_END=0.00 PRIMER_RIGHT_8_SELF_END=2.00 PRIMER_LEFT_8_MISPRIMING_SCORE=12.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_8_MISPRIMING_SCORE=12.00, L1MA5 3'-end of L1 repeat (subfamily L1MA5) - a consensus sequence PRIMER_PAIR_8_MISPRIMING_SCORE=23.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_8_END_STABILITY=5.6000 PRIMER_RIGHT_8_END_STABILITY=6.8000 PRIMER_PAIR_8_COMPL_ANY=4.00 PRIMER_PAIR_8_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_8=105 PRIMER_PAIR_PENALTY_9=0.2770 PRIMER_LEFT_9_PENALTY=0.122120 PRIMER_RIGHT_9_PENALTY=0.154904 PRIMER_LEFT_9_SEQUENCE=CAAATGTCCCTGTGAGGTCTATC PRIMER_RIGHT_9_SEQUENCE=AAATAAGTTCACAGAGGTGGGGT PRIMER_LEFT_9=3719,23 PRIMER_RIGHT_9=4029,23 PRIMER_LEFT_9_TM=59.878 PRIMER_RIGHT_9_TM=60.155 PRIMER_LEFT_9_GC_PERCENT=47.826 PRIMER_RIGHT_9_GC_PERCENT=43.478 PRIMER_LEFT_9_SELF_ANY=3.00 PRIMER_RIGHT_9_SELF_ANY=3.00 PRIMER_LEFT_9_SELF_END=0.00 PRIMER_RIGHT_9_SELF_END=0.00 PRIMER_LEFT_9_MISPRIMING_SCORE=12.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_9_MISPRIMING_SCORE=12.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_9_MISPRIMING_SCORE=24.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_9_END_STABILITY=5.6000 PRIMER_RIGHT_9_END_STABILITY=10.6000 PRIMER_PAIR_9_COMPL_ANY=6.00 PRIMER_PAIR_9_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_9=311 PRIMER_PAIR_PENALTY_10=0.2770 PRIMER_LEFT_10_PENALTY=0.122120 PRIMER_RIGHT_10_PENALTY=0.154904 PRIMER_LEFT_10_SEQUENCE=ATACCCATTCTGAAGACAGTCCA PRIMER_RIGHT_10_SEQUENCE=AAATAAGTTCACAGAGGTGGGGT PRIMER_LEFT_10=3801,23 PRIMER_RIGHT_10=4029,23 PRIMER_LEFT_10_TM=59.878 PRIMER_RIGHT_10_TM=60.155 PRIMER_LEFT_10_GC_PERCENT=43.478 PRIMER_RIGHT_10_GC_PERCENT=43.478 PRIMER_LEFT_10_SELF_ANY=5.00 PRIMER_RIGHT_10_SELF_ANY=3.00 PRIMER_LEFT_10_SELF_END=1.00 PRIMER_RIGHT_10_SELF_END=0.00 PRIMER_LEFT_10_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_10_MISPRIMING_SCORE=12.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_10_MISPRIMING_SCORE=24.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_10_END_STABILITY=7.9000 PRIMER_RIGHT_10_END_STABILITY=10.6000 PRIMER_PAIR_10_COMPL_ANY=5.00 PRIMER_PAIR_10_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_10=229 PRIMER_PAIR_PENALTY_11=0.2813 PRIMER_LEFT_11_PENALTY=0.199411 PRIMER_RIGHT_11_PENALTY=0.081865 PRIMER_LEFT_11_SEQUENCE=GCCTTACTCCTGTCTAGAGACCC PRIMER_RIGHT_11_SEQUENCE=TTATTACCAGATGGTGGAGATGG PRIMER_LEFT_11=3988,23 PRIMER_RIGHT_11=4154,23 PRIMER_LEFT_11_TM=59.801 PRIMER_RIGHT_11_TM=60.082 PRIMER_LEFT_11_GC_PERCENT=56.522 PRIMER_RIGHT_11_GC_PERCENT=43.478 PRIMER_LEFT_11_SELF_ANY=6.00 PRIMER_RIGHT_11_SELF_ANY=6.00 PRIMER_LEFT_11_SELF_END=2.00 PRIMER_RIGHT_11_SELF_END=0.00 PRIMER_LEFT_11_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_11_MISPRIMING_SCORE=12.00, reverse L1MB3 3'-end of L1 repeat (subfamily L1MB3) - a consensus sequence PRIMER_PAIR_11_MISPRIMING_SCORE=21.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_11_END_STABILITY=9.1000 PRIMER_RIGHT_11_END_STABILITY=8.1000 PRIMER_PAIR_11_COMPL_ANY=4.00 PRIMER_PAIR_11_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_11=167 PRIMER_PAIR_PENALTY_12=0.2908 PRIMER_LEFT_12_PENALTY=0.208920 PRIMER_RIGHT_12_PENALTY=0.081865 PRIMER_LEFT_12_SEQUENCE=CCAGAGTGCCTGAAGGAGTATAA PRIMER_RIGHT_12_SEQUENCE=TTATTACCAGATGGTGGAGATGG PRIMER_LEFT_12=3513,23 PRIMER_RIGHT_12=4154,23 PRIMER_LEFT_12_TM=59.791 PRIMER_RIGHT_12_TM=60.082 PRIMER_LEFT_12_GC_PERCENT=47.826 PRIMER_RIGHT_12_GC_PERCENT=43.478 PRIMER_LEFT_12_SELF_ANY=4.00 PRIMER_RIGHT_12_SELF_ANY=6.00 PRIMER_LEFT_12_SELF_END=2.00 PRIMER_RIGHT_12_SELF_END=0.00 PRIMER_LEFT_12_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_12_MISPRIMING_SCORE=12.00, reverse L1MB3 3'-end of L1 repeat (subfamily L1MB3) - a consensus sequence PRIMER_PAIR_12_MISPRIMING_SCORE=21.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_LEFT_12_END_STABILITY=5.2000 PRIMER_RIGHT_12_END_STABILITY=8.1000 PRIMER_PAIR_12_COMPL_ANY=4.00 PRIMER_PAIR_12_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_12=642 PRIMER_PAIR_PENALTY_13=0.2949 PRIMER_LEFT_13_PENALTY=0.008837 PRIMER_RIGHT_13_PENALTY=0.286105 PRIMER_LEFT_13_SEQUENCE=TGTCCCTGTGAGGTCTATCATCT PRIMER_RIGHT_13_SEQUENCE=ATAAGTTCACAGAGGTGGGGTCT PRIMER_LEFT_13=3723,23 PRIMER_RIGHT_13=4027,23 PRIMER_LEFT_13_TM=60.009 PRIMER_RIGHT_13_TM=60.286 PRIMER_LEFT_13_GC_PERCENT=47.826 PRIMER_RIGHT_13_GC_PERCENT=47.826 PRIMER_LEFT_13_SELF_ANY=3.00 PRIMER_RIGHT_13_SELF_ANY=3.00 PRIMER_LEFT_13_SELF_END=0.00 PRIMER_RIGHT_13_SELF_END=0.00 PRIMER_LEFT_13_MISPRIMING_SCORE=12.00, MER11B a consensus PRIMER_RIGHT_13_MISPRIMING_SCORE=11.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_13_MISPRIMING_SCORE=23.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_13_END_STABILITY=6.6000 PRIMER_RIGHT_13_END_STABILITY=7.6000 PRIMER_PAIR_13_COMPL_ANY=6.00 PRIMER_PAIR_13_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_13=305 PRIMER_PAIR_PENALTY_14=0.3064 PRIMER_LEFT_14_PENALTY=0.045831 PRIMER_RIGHT_14_PENALTY=0.260543 PRIMER_LEFT_14_SEQUENCE=AGAAACCTCCAATCTCATCATCA PRIMER_RIGHT_14_SEQUENCE=CCTCTGGTAGAAATGCTCCTTCT PRIMER_LEFT_14=1973,23 PRIMER_RIGHT_14=2792,23 PRIMER_LEFT_14_TM=59.954 PRIMER_RIGHT_14_TM=60.261 PRIMER_LEFT_14_GC_PERCENT=39.130 PRIMER_RIGHT_14_GC_PERCENT=47.826 PRIMER_LEFT_14_SELF_ANY=3.00 PRIMER_RIGHT_14_SELF_ANY=4.00 PRIMER_LEFT_14_SELF_END=3.00 PRIMER_RIGHT_14_SELF_END=2.00 PRIMER_LEFT_14_MISPRIMING_SCORE=12.00, HSATI Human satellite I DNA HinfI fragment PRIMER_RIGHT_14_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_14_MISPRIMING_SCORE=22.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_14_END_STABILITY=6.9000 PRIMER_RIGHT_14_END_STABILITY=6.7000 PRIMER_PAIR_14_COMPL_ANY=4.00 PRIMER_PAIR_14_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_14=820 PRIMER_PAIR_PENALTY_15=0.3073 PRIMER_LEFT_15_PENALTY=0.185154 PRIMER_RIGHT_15_PENALTY=0.122120 PRIMER_LEFT_15_SEQUENCE=CACAAGCGCTATTTGAAAAAGAT PRIMER_RIGHT_15_SEQUENCE=GATAGACCTCACAGGGACATTTG PRIMER_LEFT_15=2982,23 PRIMER_RIGHT_15=3741,23 PRIMER_LEFT_15_TM=59.815 PRIMER_RIGHT_15_TM=59.878 PRIMER_LEFT_15_GC_PERCENT=34.783 PRIMER_RIGHT_15_GC_PERCENT=47.826 PRIMER_LEFT_15_SELF_ANY=7.00 PRIMER_RIGHT_15_SELF_ANY=3.00 PRIMER_LEFT_15_SELF_END=3.00 PRIMER_RIGHT_15_SELF_END=2.00 PRIMER_LEFT_15_MISPRIMING_SCORE=12.00, L1PB1 3'-end of L1 repeat (subfamily L1PB1) - a consensus sequence PRIMER_RIGHT_15_MISPRIMING_SCORE=11.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_PAIR_15_MISPRIMING_SCORE=22.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_LEFT_15_END_STABILITY=6.6000 PRIMER_RIGHT_15_END_STABILITY=7.2000 PRIMER_PAIR_15_COMPL_ANY=4.00 PRIMER_PAIR_15_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_15=760 PRIMER_PAIR_PENALTY_16=0.3073 PRIMER_LEFT_16_PENALTY=0.185154 PRIMER_RIGHT_16_PENALTY=0.122120 PRIMER_LEFT_16_SEQUENCE=CACAAGCGCTATTTGAAAAAGAT PRIMER_RIGHT_16_SEQUENCE=TGATAGACCTCACAGGGACATTT PRIMER_LEFT_16=2982,23 PRIMER_RIGHT_16=3742,23 PRIMER_LEFT_16_TM=59.815 PRIMER_RIGHT_16_TM=59.878 PRIMER_LEFT_16_GC_PERCENT=34.783 PRIMER_RIGHT_16_GC_PERCENT=43.478 PRIMER_LEFT_16_SELF_ANY=7.00 PRIMER_RIGHT_16_SELF_ANY=3.00 PRIMER_LEFT_16_SELF_END=3.00 PRIMER_RIGHT_16_SELF_END=2.00 PRIMER_LEFT_16_MISPRIMING_SCORE=12.00, L1PB1 3'-end of L1 repeat (subfamily L1PB1) - a consensus sequence PRIMER_RIGHT_16_MISPRIMING_SCORE=12.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_PAIR_16_MISPRIMING_SCORE=23.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_LEFT_16_END_STABILITY=6.6000 PRIMER_RIGHT_16_END_STABILITY=7.2000 PRIMER_PAIR_16_COMPL_ANY=4.00 PRIMER_PAIR_16_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_16=761 PRIMER_PAIR_PENALTY_17=0.3073 PRIMER_LEFT_17_PENALTY=0.185154 PRIMER_RIGHT_17_PENALTY=0.122120 PRIMER_LEFT_17_SEQUENCE=CACAAGCGCTATTTGAAAAAGAT PRIMER_RIGHT_17_SEQUENCE=TGGACTGTCTTCAGAATGGGTAT PRIMER_LEFT_17=2982,23 PRIMER_RIGHT_17=3823,23 PRIMER_LEFT_17_TM=59.815 PRIMER_RIGHT_17_TM=59.878 PRIMER_LEFT_17_GC_PERCENT=34.783 PRIMER_RIGHT_17_GC_PERCENT=43.478 PRIMER_LEFT_17_SELF_ANY=7.00 PRIMER_RIGHT_17_SELF_ANY=5.00 PRIMER_LEFT_17_SELF_END=3.00 PRIMER_RIGHT_17_SELF_END=2.00 PRIMER_LEFT_17_MISPRIMING_SCORE=12.00, L1PB1 3'-end of L1 repeat (subfamily L1PB1) - a consensus sequence PRIMER_RIGHT_17_MISPRIMING_SCORE=12.00, L1MA5 3'-end of L1 repeat (subfamily L1MA5) - a consensus sequence PRIMER_PAIR_17_MISPRIMING_SCORE=23.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_17_END_STABILITY=6.6000 PRIMER_RIGHT_17_END_STABILITY=6.8000 PRIMER_PAIR_17_COMPL_ANY=5.00 PRIMER_PAIR_17_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_17=842 PRIMER_PAIR_PENALTY_18=0.3215 PRIMER_LEFT_18_PENALTY=0.122120 PRIMER_RIGHT_18_PENALTY=0.199411 PRIMER_LEFT_18_SEQUENCE=CAAATGTCCCTGTGAGGTCTATC PRIMER_RIGHT_18_SEQUENCE=GGGTCTCTAGACAGGAGTAAGGC PRIMER_LEFT_18=3719,23 PRIMER_RIGHT_18=4010,23 PRIMER_LEFT_18_TM=59.878 PRIMER_RIGHT_18_TM=59.801 PRIMER_LEFT_18_GC_PERCENT=47.826 PRIMER_RIGHT_18_GC_PERCENT=56.522 PRIMER_LEFT_18_SELF_ANY=3.00 PRIMER_RIGHT_18_SELF_ANY=6.00 PRIMER_LEFT_18_SELF_END=0.00 PRIMER_RIGHT_18_SELF_END=2.00 PRIMER_LEFT_18_MISPRIMING_SCORE=12.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_18_MISPRIMING_SCORE=11.00, MER21B a consensus PRIMER_PAIR_18_MISPRIMING_SCORE=23.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_18_END_STABILITY=5.6000 PRIMER_RIGHT_18_END_STABILITY=9.7000 PRIMER_PAIR_18_COMPL_ANY=5.00 PRIMER_PAIR_18_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_18=292 PRIMER_PAIR_PENALTY_19=0.3215 PRIMER_LEFT_19_PENALTY=0.122120 PRIMER_RIGHT_19_PENALTY=0.199411 PRIMER_LEFT_19_SEQUENCE=ATACCCATTCTGAAGACAGTCCA PRIMER_RIGHT_19_SEQUENCE=GGGTCTCTAGACAGGAGTAAGGC PRIMER_LEFT_19=3801,23 PRIMER_RIGHT_19=4010,23 PRIMER_LEFT_19_TM=59.878 PRIMER_RIGHT_19_TM=59.801 PRIMER_LEFT_19_GC_PERCENT=43.478 PRIMER_RIGHT_19_GC_PERCENT=56.522 PRIMER_LEFT_19_SELF_ANY=5.00 PRIMER_RIGHT_19_SELF_ANY=6.00 PRIMER_LEFT_19_SELF_END=1.00 PRIMER_RIGHT_19_SELF_END=2.00 PRIMER_LEFT_19_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_19_MISPRIMING_SCORE=11.00, MER21B a consensus PRIMER_PAIR_19_MISPRIMING_SCORE=23.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_19_END_STABILITY=7.9000 PRIMER_RIGHT_19_END_STABILITY=9.7000 PRIMER_PAIR_19_COMPL_ANY=6.00 PRIMER_PAIR_19_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_19=210 =