PRIMER_SEQUENCE_ID=NM_003985 SEQUENCE=GAGTCGCCGCTTCCGCCTTGACCAGGTGGAGCTGGAGACCTGGTCTCTCTAGGGCCTGCCCTGAGCTCACCATCTGAAGGAGAGTGCCATCATCCTTAGGAACTCCTTCTCCAGACATGCTTCCCGAGGCTGGCTCCCTGTGGCTACTGAAGCTGCTCCGGGACATCCAGTTGGCCCAGTTTTACTGGCCCATCCTAGAGGAGCTTAATGTCACCCGGCCAGGGCACTTCGACTTTGTAAAGCCTGAGGACCTGGACGGCATTGGCATGGGCCGGCCTGCCCAACGCAGACTGTCCGAAGCTCTGAAAAGCCTACGTTCTGGGCCTAAGTCTAAGAACTGGGTCTACAAGATCCTTGGAGGTTTTGCCCCTGAGCACAAGGAGCCCACCCTGCCCACGGACAGCCCACGGCACCTCCCTGAGCCAGAGGGGGGCCTCAAGTGTCTGATCCCAGAGGGTGCTGTTTGCAGAGGGGAGCTGCTGGGTTCAGGCTGCTTCGGTGTGGTGCACCGAGGGCTGTGGACGCTGCCCAGTGGCAAGAGTGTCCCAGTGGCTGTCAAGTCCCTCCGGGTAGGTCCCGAAGGCCCGATGGGCACAGAACTGGGGGACTTCCTGCGAGAGGTATCGGTCATGATGAACTTGGAGCACCCACACGTGCTGCGTCTGCACGGCCTTGTACTGGGCCAGCCTCTGCAGATGGTGATGGAGCTGGCGCCACTGGGCTCCCTGCACGCGCGCTTAACGGCCCCGGCCCCGACACCCCCGCTGCTCGTGGCCCTGCTCTGCCTCTTCCTGCGGCAGCTGGCGGGAGCCATGGCGTACCTGGGGGCCCGCGGGCTGGTGCACCGAGACCTCGCTACGCGCAACCTACAGCTGGCGTCGCCGCGCACCATCAAGGTGGCTGACTTCGGGCTGGTGCGGCCTCTGGGCGGTGCCCGGGGCCGCTACGTCATGGGCGGGCCCCGCCCTATCCCCTACACCTGGTGTGCCCCAGAGAGCCTGCGCCACGGAGCCTTCTCGTCTGCCTCGGACGTGTGGATGTTTGGGGTGACGCTGTGGGAGATGTTCTCCGGGGGCGAGGAACCCTGGCCCGGGGTCCCACCGTACCTCATCCTGCAGCGGCTGGAGGACAGAGCCCGGCTGCCTAGGCCTCCCCCCTCCTCCAGGGCCCTCTACTCCCTCGCCTTGCGCTGCTGGGCCCCCCACCCTGCCGACCGGCCTAGCTTTTCCCACCTGGAGGGGCTGCTGCAAGAGGCCGGGCCTTCGGAAGCATGTTGTGTGAGGGATGCCACAGAACCAGGCGCCCTGAGGATGGAGACTGGTGACCCCATCACAGTCATCGAGGGCAGCTCCTCTTTCCACAGCCCCGACTCCACAATCTGGAAGGACCAGAATGGTCGCACCTTCAAAGTGGGCAGCTTCCCAGCCTCGGCAGTGACGCTGACAGATGCGGGGGGCTTGCCAGCCACCCGTCCAGTCCACAGAGGCACCCCTGCCCGGGGAGATCAACACCCAGGAAGCATAGATGGAGACAGAAAGAAGGCAAATCTTTGGGATGCGCCCCCAGCACGGGGCCAGAGGAGGAACATGCCCCTGGAGAGGATGAAAGGCATTTCCAGGAGTCTGGAGTCAGTTCTGTCCCTCGGTCCTCGTCCCACAGGGGGTGGTTCAAGCCCCCCTGAAATTCGACAAGCCAGAGCTGTGCCCCAGGGACCTCCAGGCCTGCCTCCACGCCCACCTTTATCCTCTAGCTCTCCTCAGCCCAGCCAGCCCTCTAGGGAGAGGCTTCCCTGGCCCGAAAGAAAACCCCCACACAATCACCCCATGGGAATGCCTGGAGCCCGTAAAGCCGCTGCCCTCTCTGGAGGCCTCTTGTCCGATCCTGAGTTGCAGAGGAAGATTATGGAAATGGAGCTGAGTGTGCATTGGGTCACCCACCAGGAGTGCCAGACAGCACTAGGAGCCACTGGGGGAGATGTGGCTTCTGCCATCCGGAACCTCAAGGTAGATCAGCTCTTCCTCCTGAGTAGCCGGTCCAGAGCTGACTGCTGGCGCATCCTGGAGCATTACCAGTGGGACCTCTCAGCTGCCAGCCGTTATGTCCTGGCCAGGCCCTGAGCCCAGCTTCTGCGGGCACAGACACCAGCATGAAAAGCCTAGGTCCCTGAGGGCCTGGCCACATGGGACCAAGTGGAACCAGAACAAGGCCCCGACAGGGGTAGACGTTCCACTTGTGGAGATCCCACCTGCCGCTAGGCACGTGGAGGAGGAGCCCAGAGTTGGGCACTGGCAAATGTCTCCTCCCTCCCATGCTCCTTGGCTTCTGAAGGCTGAAGCCCCTTTGGCTGGGCCAAGAAGGATCTAGTCTGCCCACTACATTCTCAAACAAGAGGACTTGGAGGAAAAGAGCTACTATACATCATATGCAGAGGAAGCTTCTACGCGCTAGAGAGGATCAAGGGGCCACACTGGACCATGTGAACAGCCATCCGGAACTGCCATCAGCTACCACACTGGACTCTGCAGGGCAGCCATCCTGGATGATGGAAGCCACCATATTGACCTGGGGTATAGGCCCAAACTGCCTTCGTTTGGTCCAGGGCCATCGTGGGTGATGACGATTGCTCTCTTGCACTCATGGACATTTGATGCTGGTAGTATGGATTATGAGATGGACTAGCCCCTGCTCCAGCCCAGTTCTCACATTCCCCTTTGTTTTTTCCCATACCAACTGCTTCTACCCTCCCCTATTACATACATCTTTCAATGTCC PRIMER_OPT_SIZE=23 PRIMER_MIN_SIZE=15 PRIMER_MAX_SIZE=26 PRIMER_MISPRIMING_LIBRARY=Human_rep_in_fasta.txt PRIMER_NUM_RETURN=20 PRIMER_NUM_NS_ACCEPTED=1 PRIMER_PRODUCT_SIZE_RANGE=100-999 PRIMER_EXPLAIN_FLAG=1 PRIMER_LEFT_EXPLAIN=considered 31343, GC content failed 1041, low tm 6655, high tm 17892, high any compl 37, high end compl 61, high repeat similarity 82, long poly-x seq 97, ok 5478 PRIMER_RIGHT_EXPLAIN=considered 31170, GC content failed 1035, low tm 6794, high tm 17589, high end compl 6, high repeat similarity 8, long poly-x seq 118, ok 5620 PRIMER_PAIR_EXPLAIN=considered 1536, unacceptable product size 1464, high end compl 11, ok 61 PRIMER_PAIR_PENALTY=0.0576 PRIMER_LEFT_PENALTY=0.037017 PRIMER_RIGHT_PENALTY=0.020535 PRIMER_LEFT_SEQUENCE=CAGGAGTCTGGAGTCAGTTCTGT PRIMER_RIGHT_SEQUENCE=CACTCAGCTCCATTTCCATAATC PRIMER_LEFT=1615,23 PRIMER_RIGHT=1919,23 PRIMER_LEFT_TM=59.963 PRIMER_RIGHT_TM=59.979 PRIMER_LEFT_GC_PERCENT=52.174 PRIMER_RIGHT_GC_PERCENT=43.478 PRIMER_LEFT_SELF_ANY=4.00 PRIMER_RIGHT_SELF_ANY=4.00 PRIMER_LEFT_SELF_END=2.00 PRIMER_RIGHT_SELF_END=1.00 PRIMER_LEFT_MISPRIMING_SCORE=12.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_RIGHT_MISPRIMING_SCORE=12.00, L1MD1 3'-end of L1 repeat (subfamily L1MD1) - a consensus sequence PRIMER_PAIR_MISPRIMING_SCORE=22.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_END_STABILITY=6.4000 PRIMER_RIGHT_END_STABILITY=5.9000 PRIMER_PAIR_COMPL_ANY=6.00 PRIMER_PAIR_COMPL_END=2.00 PRIMER_PRODUCT_SIZE=305 PRIMER_PAIR_PENALTY_1=0.1022 PRIMER_LEFT_1_PENALTY=0.091795 PRIMER_RIGHT_1_PENALTY=0.010384 PRIMER_LEFT_1_SEQUENCE=TTCTCAAACAAGAGGACTTGGAG PRIMER_RIGHT_1_SEQUENCE=TAGAAGCAGTTGGTATGGGAAAA PRIMER_LEFT_1=2377,23 PRIMER_RIGHT_1=2738,23 PRIMER_LEFT_1_TM=59.908 PRIMER_RIGHT_1_TM=60.010 PRIMER_LEFT_1_GC_PERCENT=43.478 PRIMER_RIGHT_1_GC_PERCENT=39.130 PRIMER_LEFT_1_SELF_ANY=4.00 PRIMER_RIGHT_1_SELF_ANY=2.00 PRIMER_LEFT_1_SELF_END=1.00 PRIMER_RIGHT_1_SELF_END=0.00 PRIMER_LEFT_1_MISPRIMING_SCORE=11.00, L1MA10 3'-end of L1 repeat (subfamily L1MA10) - a consensus sequence PRIMER_RIGHT_1_MISPRIMING_SCORE=11.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_1_MISPRIMING_SCORE=22.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_1_END_STABILITY=8.2000 PRIMER_RIGHT_1_END_STABILITY=7.3000 PRIMER_PAIR_1_COMPL_ANY=5.00 PRIMER_PAIR_1_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_1=362 PRIMER_PAIR_PENALTY_2=0.1552 PRIMER_LEFT_2_PENALTY=0.002035 PRIMER_RIGHT_2_PENALTY=0.153194 PRIMER_LEFT_2_SEQUENCE=CCCATCCTAGAGGAGCTTAATGT PRIMER_RIGHT_2_SEQUENCE=GTTCATCATGACCGATACCTCTC PRIMER_LEFT_2=188,23 PRIMER_RIGHT_2=637,23 PRIMER_LEFT_2_TM=59.998 PRIMER_RIGHT_2_TM=59.847 PRIMER_LEFT_2_GC_PERCENT=47.826 PRIMER_RIGHT_2_GC_PERCENT=47.826 PRIMER_LEFT_2_SELF_ANY=6.00 PRIMER_RIGHT_2_SELF_ANY=7.00 PRIMER_LEFT_2_SELF_END=2.00 PRIMER_RIGHT_2_SELF_END=2.00 PRIMER_LEFT_2_MISPRIMING_SCORE=12.00, MER34 a consensus PRIMER_RIGHT_2_MISPRIMING_SCORE=12.00, MSTc consensus sequence PRIMER_PAIR_2_MISPRIMING_SCORE=22.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_2_END_STABILITY=6.6000 PRIMER_RIGHT_2_END_STABILITY=6.4000 PRIMER_PAIR_2_COMPL_ANY=5.00 PRIMER_PAIR_2_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_2=450 PRIMER_PAIR_PENALTY_3=0.1611 PRIMER_LEFT_3_PENALTY=0.150712 PRIMER_RIGHT_3_PENALTY=0.010384 PRIMER_LEFT_3_SEQUENCE=CATTCTCAAACAAGAGGACTTGG PRIMER_RIGHT_3_SEQUENCE=TAGAAGCAGTTGGTATGGGAAAA PRIMER_LEFT_3=2375,23 PRIMER_RIGHT_3=2738,23 PRIMER_LEFT_3_TM=60.151 PRIMER_RIGHT_3_TM=60.010 PRIMER_LEFT_3_GC_PERCENT=43.478 PRIMER_RIGHT_3_GC_PERCENT=39.130 PRIMER_LEFT_3_SELF_ANY=4.00 PRIMER_RIGHT_3_SELF_ANY=2.00 PRIMER_LEFT_3_SELF_END=2.00 PRIMER_RIGHT_3_SELF_END=0.00 PRIMER_LEFT_3_MISPRIMING_SCORE=11.00, L1MA10 3'-end of L1 repeat (subfamily L1MA10) - a consensus sequence PRIMER_RIGHT_3_MISPRIMING_SCORE=11.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_3_MISPRIMING_SCORE=21.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_3_END_STABILITY=8.5000 PRIMER_RIGHT_3_END_STABILITY=7.3000 PRIMER_PAIR_3_COMPL_ANY=5.00 PRIMER_PAIR_3_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_3=364 PRIMER_PAIR_PENALTY_4=0.1877 PRIMER_LEFT_4_PENALTY=0.037017 PRIMER_RIGHT_4_PENALTY=0.150712 PRIMER_LEFT_4_SEQUENCE=CAGGAGTCTGGAGTCAGTTCTGT PRIMER_RIGHT_4_SEQUENCE=CCAAGTCCTCTTGTTTGAGAATG PRIMER_LEFT_4=1615,23 PRIMER_RIGHT_4=2397,23 PRIMER_LEFT_4_TM=59.963 PRIMER_RIGHT_4_TM=60.151 PRIMER_LEFT_4_GC_PERCENT=52.174 PRIMER_RIGHT_4_GC_PERCENT=43.478 PRIMER_LEFT_4_SELF_ANY=4.00 PRIMER_RIGHT_4_SELF_ANY=4.00 PRIMER_LEFT_4_SELF_END=2.00 PRIMER_RIGHT_4_SELF_END=0.00 PRIMER_LEFT_4_MISPRIMING_SCORE=12.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_RIGHT_4_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_4_MISPRIMING_SCORE=22.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_4_END_STABILITY=6.4000 PRIMER_RIGHT_4_END_STABILITY=6.9000 PRIMER_PAIR_4_COMPL_ANY=5.00 PRIMER_PAIR_4_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_4=783 PRIMER_PAIR_PENALTY_5=0.2156 PRIMER_LEFT_5_PENALTY=0.205235 PRIMER_RIGHT_5_PENALTY=0.010384 PRIMER_LEFT_5_SEQUENCE=ACCATATTGACCTGGGGTATAGG PRIMER_RIGHT_5_SEQUENCE=TAGAAGCAGTTGGTATGGGAAAA PRIMER_LEFT_5=2551,23 PRIMER_RIGHT_5=2738,23 PRIMER_LEFT_5_TM=60.205 PRIMER_RIGHT_5_TM=60.010 PRIMER_LEFT_5_GC_PERCENT=47.826 PRIMER_RIGHT_5_GC_PERCENT=39.130 PRIMER_LEFT_5_SELF_ANY=4.00 PRIMER_RIGHT_5_SELF_ANY=2.00 PRIMER_LEFT_5_SELF_END=3.00 PRIMER_RIGHT_5_SELF_END=0.00 PRIMER_LEFT_5_MISPRIMING_SCORE=12.00, reverse HSATI Human satellite I DNA HinfI fragment PRIMER_RIGHT_5_MISPRIMING_SCORE=11.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_5_MISPRIMING_SCORE=21.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_5_END_STABILITY=7.1000 PRIMER_RIGHT_5_END_STABILITY=7.3000 PRIMER_PAIR_5_COMPL_ANY=5.00 PRIMER_PAIR_5_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_5=188 PRIMER_PAIR_PENALTY_6=0.2364 PRIMER_LEFT_6_PENALTY=0.037017 PRIMER_RIGHT_6_PENALTY=0.199411 PRIMER_LEFT_6_SEQUENCE=CAGGAGTCTGGAGTCAGTTCTGT PRIMER_RIGHT_6_SEQUENCE=AGTGGGCAGACTAGATCCTTCTT PRIMER_LEFT_6=1615,23 PRIMER_RIGHT_6=2373,23 PRIMER_LEFT_6_TM=59.963 PRIMER_RIGHT_6_TM=59.801 PRIMER_LEFT_6_GC_PERCENT=52.174 PRIMER_RIGHT_6_GC_PERCENT=47.826 PRIMER_LEFT_6_SELF_ANY=4.00 PRIMER_RIGHT_6_SELF_ANY=4.00 PRIMER_LEFT_6_SELF_END=2.00 PRIMER_RIGHT_6_SELF_END=0.00 PRIMER_LEFT_6_MISPRIMING_SCORE=12.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_RIGHT_6_MISPRIMING_SCORE=11.00, MER1B Nonautonomous DNA transposon PRIMER_PAIR_6_MISPRIMING_SCORE=21.00, reverse L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_LEFT_6_END_STABILITY=6.4000 PRIMER_RIGHT_6_END_STABILITY=7.0000 PRIMER_PAIR_6_COMPL_ANY=6.00 PRIMER_PAIR_6_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_6=759 PRIMER_PAIR_PENALTY_7=0.2420 PRIMER_LEFT_7_PENALTY=0.088826 PRIMER_RIGHT_7_PENALTY=0.153194 PRIMER_LEFT_7_SEQUENCE=AAGCTCTGAAAAGCCTACGTTCT PRIMER_RIGHT_7_SEQUENCE=GTTCATCATGACCGATACCTCTC PRIMER_LEFT_7=297,23 PRIMER_RIGHT_7=637,23 PRIMER_LEFT_7_TM=60.089 PRIMER_RIGHT_7_TM=59.847 PRIMER_LEFT_7_GC_PERCENT=43.478 PRIMER_RIGHT_7_GC_PERCENT=47.826 PRIMER_LEFT_7_SELF_ANY=4.00 PRIMER_RIGHT_7_SELF_ANY=7.00 PRIMER_LEFT_7_SELF_END=2.00 PRIMER_RIGHT_7_SELF_END=2.00 PRIMER_LEFT_7_MISPRIMING_SCORE=12.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_7_MISPRIMING_SCORE=12.00, MSTc consensus sequence PRIMER_PAIR_7_MISPRIMING_SCORE=23.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_7_END_STABILITY=6.4000 PRIMER_RIGHT_7_END_STABILITY=6.4000 PRIMER_PAIR_7_COMPL_ANY=4.00 PRIMER_PAIR_7_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_7=341 PRIMER_PAIR_PENALTY_8=0.2423 PRIMER_LEFT_8_PENALTY=0.037017 PRIMER_RIGHT_8_PENALTY=0.205235 PRIMER_LEFT_8_SEQUENCE=CAGGAGTCTGGAGTCAGTTCTGT PRIMER_RIGHT_8_SEQUENCE=CCTATACCCCAGGTCAATATGGT PRIMER_LEFT_8=1615,23 PRIMER_RIGHT_8=2573,23 PRIMER_LEFT_8_TM=59.963 PRIMER_RIGHT_8_TM=60.205 PRIMER_LEFT_8_GC_PERCENT=52.174 PRIMER_RIGHT_8_GC_PERCENT=47.826 PRIMER_LEFT_8_SELF_ANY=4.00 PRIMER_RIGHT_8_SELF_ANY=4.00 PRIMER_LEFT_8_SELF_END=2.00 PRIMER_RIGHT_8_SELF_END=2.00 PRIMER_LEFT_8_MISPRIMING_SCORE=12.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_RIGHT_8_MISPRIMING_SCORE=12.00, MSTc consensus sequence PRIMER_PAIR_8_MISPRIMING_SCORE=21.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_LEFT_8_END_STABILITY=6.4000 PRIMER_RIGHT_8_END_STABILITY=7.8000 PRIMER_PAIR_8_COMPL_ANY=5.00 PRIMER_PAIR_8_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_8=959 PRIMER_PAIR_PENALTY_9=0.2467 PRIMER_LEFT_9_PENALTY=0.091795 PRIMER_RIGHT_9_PENALTY=0.154909 PRIMER_LEFT_9_SEQUENCE=TTCTCAAACAAGAGGACTTGGAG PRIMER_RIGHT_9_SEQUENCE=AGGGGCTAGTCCATCTCATAATC PRIMER_LEFT_9=2377,23 PRIMER_RIGHT_9=2683,23 PRIMER_LEFT_9_TM=59.908 PRIMER_RIGHT_9_TM=59.845 PRIMER_LEFT_9_GC_PERCENT=43.478 PRIMER_RIGHT_9_GC_PERCENT=47.826 PRIMER_LEFT_9_SELF_ANY=4.00 PRIMER_RIGHT_9_SELF_ANY=6.00 PRIMER_LEFT_9_SELF_END=1.00 PRIMER_RIGHT_9_SELF_END=1.00 PRIMER_LEFT_9_MISPRIMING_SCORE=11.00, L1MA10 3'-end of L1 repeat (subfamily L1MA10) - a consensus sequence PRIMER_RIGHT_9_MISPRIMING_SCORE=12.00, L1MC2 3'-end of L1 repeat (subfamily L1MC2) - a consensus sequence PRIMER_PAIR_9_MISPRIMING_SCORE=23.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_9_END_STABILITY=8.2000 PRIMER_RIGHT_9_END_STABILITY=5.9000 PRIMER_PAIR_9_COMPL_ANY=6.00 PRIMER_PAIR_9_COMPL_END=3.00 PRIMER_PRODUCT_SIZE_9=307 PRIMER_PAIR_PENALTY_10=0.2512 PRIMER_LEFT_10_PENALTY=0.230707 PRIMER_RIGHT_10_PENALTY=0.020535 PRIMER_LEFT_10_SEQUENCE=CCACCTTTATCCTCTAGCTCTCC PRIMER_RIGHT_10_SEQUENCE=CACTCAGCTCCATTTCCATAATC PRIMER_LEFT_10=1733,23 PRIMER_RIGHT_10=1919,23 PRIMER_LEFT_10_TM=59.769 PRIMER_RIGHT_10_TM=59.979 PRIMER_LEFT_10_GC_PERCENT=52.174 PRIMER_RIGHT_10_GC_PERCENT=43.478 PRIMER_LEFT_10_SELF_ANY=4.00 PRIMER_RIGHT_10_SELF_ANY=4.00 PRIMER_LEFT_10_SELF_END=0.00 PRIMER_RIGHT_10_SELF_END=1.00 PRIMER_LEFT_10_MISPRIMING_SCORE=12.00, MER21 a consensus PRIMER_RIGHT_10_MISPRIMING_SCORE=12.00, L1MD1 3'-end of L1 repeat (subfamily L1MD1) - a consensus sequence PRIMER_PAIR_10_MISPRIMING_SCORE=22.00, MER39 a consensus PRIMER_LEFT_10_END_STABILITY=7.9000 PRIMER_RIGHT_10_END_STABILITY=5.9000 PRIMER_PAIR_10_COMPL_ANY=4.00 PRIMER_PAIR_10_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_10=187 PRIMER_PAIR_PENALTY_11=0.2677 PRIMER_LEFT_11_PENALTY=0.037017 PRIMER_RIGHT_11_PENALTY=0.230707 PRIMER_LEFT_11_SEQUENCE=CAGGAGTCTGGAGTCAGTTCTGT PRIMER_RIGHT_11_SEQUENCE=GAGAGCTAGAGGATAAAGGTGGG PRIMER_LEFT_11=1615,23 PRIMER_RIGHT_11=1754,23 PRIMER_LEFT_11_TM=59.963 PRIMER_RIGHT_11_TM=59.769 PRIMER_LEFT_11_GC_PERCENT=52.174 PRIMER_RIGHT_11_GC_PERCENT=52.174 PRIMER_LEFT_11_SELF_ANY=4.00 PRIMER_RIGHT_11_SELF_ANY=4.00 PRIMER_LEFT_11_SELF_END=2.00 PRIMER_RIGHT_11_SELF_END=0.00 PRIMER_LEFT_11_MISPRIMING_SCORE=12.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_RIGHT_11_MISPRIMING_SCORE=12.00, MER21 a consensus PRIMER_PAIR_11_MISPRIMING_SCORE=22.00, reverse L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_LEFT_11_END_STABILITY=6.4000 PRIMER_RIGHT_11_END_STABILITY=9.4000 PRIMER_PAIR_11_COMPL_ANY=4.00 PRIMER_PAIR_11_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_11=140 PRIMER_PAIR_PENALTY_12=0.2716 PRIMER_LEFT_12_PENALTY=0.261219 PRIMER_RIGHT_12_PENALTY=0.010384 PRIMER_LEFT_12_SEQUENCE=GAGTTGCAGAGGAAGATTATGGA PRIMER_RIGHT_12_SEQUENCE=TAGAAGCAGTTGGTATGGGAAAA PRIMER_LEFT_12=1883,23 PRIMER_RIGHT_12=2738,23 PRIMER_LEFT_12_TM=59.739 PRIMER_RIGHT_12_TM=60.010 PRIMER_LEFT_12_GC_PERCENT=43.478 PRIMER_RIGHT_12_GC_PERCENT=39.130 PRIMER_LEFT_12_SELF_ANY=4.00 PRIMER_RIGHT_12_SELF_ANY=2.00 PRIMER_LEFT_12_SELF_END=0.00 PRIMER_RIGHT_12_SELF_END=0.00 PRIMER_LEFT_12_MISPRIMING_SCORE=12.00, reverse MER4C a consensus PRIMER_RIGHT_12_MISPRIMING_SCORE=11.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_12_MISPRIMING_SCORE=22.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_12_END_STABILITY=8.1000 PRIMER_RIGHT_12_END_STABILITY=7.3000 PRIMER_PAIR_12_COMPL_ANY=3.00 PRIMER_PAIR_12_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_12=856 PRIMER_PAIR_PENALTY_13=0.2818 PRIMER_LEFT_13_PENALTY=0.261219 PRIMER_RIGHT_13_PENALTY=0.020535 PRIMER_LEFT_13_SEQUENCE=GGAAGCATAGATGGAGACAGAAA PRIMER_RIGHT_13_SEQUENCE=CACTCAGCTCCATTTCCATAATC PRIMER_LEFT_13=1514,23 PRIMER_RIGHT_13=1919,23 PRIMER_LEFT_13_TM=59.739 PRIMER_RIGHT_13_TM=59.979 PRIMER_LEFT_13_GC_PERCENT=43.478 PRIMER_RIGHT_13_GC_PERCENT=43.478 PRIMER_LEFT_13_SELF_ANY=4.00 PRIMER_RIGHT_13_SELF_ANY=4.00 PRIMER_LEFT_13_SELF_END=0.00 PRIMER_RIGHT_13_SELF_END=1.00 PRIMER_LEFT_13_MISPRIMING_SCORE=12.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_RIGHT_13_MISPRIMING_SCORE=12.00, L1MD1 3'-end of L1 repeat (subfamily L1MD1) - a consensus sequence PRIMER_PAIR_13_MISPRIMING_SCORE=24.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_13_END_STABILITY=7.0000 PRIMER_RIGHT_13_END_STABILITY=5.9000 PRIMER_PAIR_13_COMPL_ANY=6.00 PRIMER_PAIR_13_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_13=406 PRIMER_PAIR_PENALTY_14=0.2982 PRIMER_LEFT_14_PENALTY=0.037017 PRIMER_RIGHT_14_PENALTY=0.261219 PRIMER_LEFT_14_SEQUENCE=CAGGAGTCTGGAGTCAGTTCTGT PRIMER_RIGHT_14_SEQUENCE=TCCATAATCTTCCTCTGCAACTC PRIMER_LEFT_14=1615,23 PRIMER_RIGHT_14=1905,23 PRIMER_LEFT_14_TM=59.963 PRIMER_RIGHT_14_TM=59.739 PRIMER_LEFT_14_GC_PERCENT=52.174 PRIMER_RIGHT_14_GC_PERCENT=43.478 PRIMER_LEFT_14_SELF_ANY=4.00 PRIMER_RIGHT_14_SELF_ANY=4.00 PRIMER_LEFT_14_SELF_END=2.00 PRIMER_RIGHT_14_SELF_END=0.00 PRIMER_LEFT_14_MISPRIMING_SCORE=12.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_RIGHT_14_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_14_MISPRIMING_SCORE=23.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_LEFT_14_END_STABILITY=6.4000 PRIMER_RIGHT_14_END_STABILITY=6.4000 PRIMER_PAIR_14_COMPL_ANY=5.00 PRIMER_PAIR_14_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_14=291 PRIMER_PAIR_PENALTY_15=0.3056 PRIMER_LEFT_15_PENALTY=0.150712 PRIMER_RIGHT_15_PENALTY=0.154909 PRIMER_LEFT_15_SEQUENCE=CATTCTCAAACAAGAGGACTTGG PRIMER_RIGHT_15_SEQUENCE=AGGGGCTAGTCCATCTCATAATC PRIMER_LEFT_15=2375,23 PRIMER_RIGHT_15=2683,23 PRIMER_LEFT_15_TM=60.151 PRIMER_RIGHT_15_TM=59.845 PRIMER_LEFT_15_GC_PERCENT=43.478 PRIMER_RIGHT_15_GC_PERCENT=47.826 PRIMER_LEFT_15_SELF_ANY=4.00 PRIMER_RIGHT_15_SELF_ANY=6.00 PRIMER_LEFT_15_SELF_END=2.00 PRIMER_RIGHT_15_SELF_END=1.00 PRIMER_LEFT_15_MISPRIMING_SCORE=11.00, L1MA10 3'-end of L1 repeat (subfamily L1MA10) - a consensus sequence PRIMER_RIGHT_15_MISPRIMING_SCORE=12.00, L1MC2 3'-end of L1 repeat (subfamily L1MC2) - a consensus sequence PRIMER_PAIR_15_MISPRIMING_SCORE=22.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_15_END_STABILITY=8.5000 PRIMER_RIGHT_15_END_STABILITY=5.9000 PRIMER_PAIR_15_COMPL_ANY=6.00 PRIMER_PAIR_15_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_15=309 PRIMER_PAIR_PENALTY_16=0.3174 PRIMER_LEFT_16_PENALTY=0.315379 PRIMER_RIGHT_16_PENALTY=0.002035 PRIMER_LEFT_16_SEQUENCE=CCATCATCCTTAGGAACTCCTTC PRIMER_RIGHT_16_SEQUENCE=ACATTAAGCTCCTCTAGGATGGG PRIMER_LEFT_16=86,23 PRIMER_RIGHT_16=210,23 PRIMER_LEFT_16_TM=60.315 PRIMER_RIGHT_16_TM=59.998 PRIMER_LEFT_16_GC_PERCENT=47.826 PRIMER_RIGHT_16_GC_PERCENT=47.826 PRIMER_LEFT_16_SELF_ANY=7.00 PRIMER_RIGHT_16_SELF_ANY=6.00 PRIMER_LEFT_16_SELF_END=2.00 PRIMER_RIGHT_16_SELF_END=2.00 PRIMER_LEFT_16_MISPRIMING_SCORE=12.00, HSATI Human satellite I DNA HinfI fragment PRIMER_RIGHT_16_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_16_MISPRIMING_SCORE=22.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_16_END_STABILITY=8.2000 PRIMER_RIGHT_16_END_STABILITY=9.6000 PRIMER_PAIR_16_COMPL_ANY=8.00 PRIMER_PAIR_16_COMPL_END=3.00 PRIMER_PRODUCT_SIZE_16=125 PRIMER_PAIR_PENALTY_17=0.3523 PRIMER_LEFT_17_PENALTY=0.091795 PRIMER_RIGHT_17_PENALTY=0.260543 PRIMER_LEFT_17_SEQUENCE=TTCTCAAACAAGAGGACTTGGAG PRIMER_RIGHT_17_SEQUENCE=AAACAAAGGGGAATGTGAGAACT PRIMER_LEFT_17=2377,23 PRIMER_RIGHT_17=2716,23 PRIMER_LEFT_17_TM=59.908 PRIMER_RIGHT_17_TM=60.261 PRIMER_LEFT_17_GC_PERCENT=43.478 PRIMER_RIGHT_17_GC_PERCENT=39.130 PRIMER_LEFT_17_SELF_ANY=4.00 PRIMER_RIGHT_17_SELF_ANY=3.00 PRIMER_LEFT_17_SELF_END=1.00 PRIMER_RIGHT_17_SELF_END=2.00 PRIMER_LEFT_17_MISPRIMING_SCORE=11.00, L1MA10 3'-end of L1 repeat (subfamily L1MA10) - a consensus sequence PRIMER_RIGHT_17_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_17_MISPRIMING_SCORE=23.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_17_END_STABILITY=8.2000 PRIMER_RIGHT_17_END_STABILITY=6.4000 PRIMER_PAIR_17_COMPL_ANY=6.00 PRIMER_PAIR_17_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_17=340 PRIMER_PAIR_PENALTY_18=0.3601 PRIMER_LEFT_18_PENALTY=0.205235 PRIMER_RIGHT_18_PENALTY=0.154909 PRIMER_LEFT_18_SEQUENCE=ACCATATTGACCTGGGGTATAGG PRIMER_RIGHT_18_SEQUENCE=AGGGGCTAGTCCATCTCATAATC PRIMER_LEFT_18=2551,23 PRIMER_RIGHT_18=2683,23 PRIMER_LEFT_18_TM=60.205 PRIMER_RIGHT_18_TM=59.845 PRIMER_LEFT_18_GC_PERCENT=47.826 PRIMER_RIGHT_18_GC_PERCENT=47.826 PRIMER_LEFT_18_SELF_ANY=4.00 PRIMER_RIGHT_18_SELF_ANY=6.00 PRIMER_LEFT_18_SELF_END=3.00 PRIMER_RIGHT_18_SELF_END=1.00 PRIMER_LEFT_18_MISPRIMING_SCORE=12.00, reverse HSATI Human satellite I DNA HinfI fragment PRIMER_RIGHT_18_MISPRIMING_SCORE=12.00, L1MC2 3'-end of L1 repeat (subfamily L1MC2) - a consensus sequence PRIMER_PAIR_18_MISPRIMING_SCORE=22.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_18_END_STABILITY=7.1000 PRIMER_RIGHT_18_END_STABILITY=5.9000 PRIMER_PAIR_18_COMPL_ANY=4.00 PRIMER_PAIR_18_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_18=133 PRIMER_PAIR_PENALTY_19=0.3763 PRIMER_LEFT_19_PENALTY=0.365880 PRIMER_RIGHT_19_PENALTY=0.010384 PRIMER_LEFT_19_SEQUENCE=GAGGACTTGGAGGAAAAGAGCTA PRIMER_RIGHT_19_SEQUENCE=TAGAAGCAGTTGGTATGGGAAAA PRIMER_LEFT_19=2388,23 PRIMER_RIGHT_19=2738,23 PRIMER_LEFT_19_TM=60.366 PRIMER_RIGHT_19_TM=60.010 PRIMER_LEFT_19_GC_PERCENT=47.826 PRIMER_RIGHT_19_GC_PERCENT=39.130 PRIMER_LEFT_19_SELF_ANY=4.00 PRIMER_RIGHT_19_SELF_ANY=2.00 PRIMER_LEFT_19_SELF_END=2.00 PRIMER_RIGHT_19_SELF_END=0.00 PRIMER_LEFT_19_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_19_MISPRIMING_SCORE=11.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_19_MISPRIMING_SCORE=23.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_19_END_STABILITY=7.2000 PRIMER_RIGHT_19_END_STABILITY=7.3000 PRIMER_PAIR_19_COMPL_ANY=3.00 PRIMER_PAIR_19_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_19=351 =