PRIMER_SEQUENCE_ID=NM_002849 SEQUENCE=CAGCTAAGACCCGGAGAGGTGGAATTTCACTTTGAAATTCCCTTGCCTCGTGAGGGCCGGCGCTGGGCATGCTCAGTAGCCGCGGCGCTGCTGCTGGGCTGCTGGGCTGGCGCGGAGTCCACCCTGCCGTCTCCGCCTTGGCTTCTGGGCGTCCAGAAGGCCAGGCATTTGCCGCCTCTGAGCGCTTCTGTTCCCCTTACCCGCAACCTCCTACTGCTCTTCCTCTCTCCCTCTCTTAGGGAGGTTGAAGCTGGTGCTGGTTTCTGTCGGCGCCACAGACTGACTGCTCTGCAAACCCCAGCCGAGGACCTGAATCCCGGAGACTAGAAGACCCTTGGCGGTGGCTCTTTCTAATAGCACTTTACCTGAAGTGGGGTCGTGGTGGAGTTTCTCCTCCACCTCTCAATGCAAACACTATGCGGAGAGCAGTCTGCTTCCCTGCGCTGTGCCTGCTCCTTAATCTTCACGCTGCAGGGTGCTTTTCAGGAAACAATGATCATTTTTTGGCAATTAATCAGAAGAAGAGTGGGAAGCCGGTATTCATTTATAAGCATTCACAAGACATTGAGAAGAGCCTGGATATAGCCCCACAAAAAATCTACAGACATAGCTACCATTCCTCTTCCGAAGCTCAAGTAAGCAAACGCCACCAGATTGTCAATTCAGCATTTCCTAGACCCGCATATGACCCGTCTCTCAATCTGCTGGCCATGGATGGTCAAGATCTTGAAGTGGAAAATCTCCCAATCCCAGCAGCAAATGTAATTGTGGTGACACTGCAAATGGATGTAAACAAGCTGAACATAACCTTGCTTCGGATCTTCCGCCAAGGAGTGGCTGCAGCTTTAGGACTCTTACCCCAGCAAGTGCACATCAATCGCCTCATTGGAAAGAAGAACAGTATTGAACTGTTTGTGTCTCCCATAAACCGAAAAACAGGAATTTCTGATGCTCTGCCCTCTGAGGAAGTTCTTCGTTCACTTAATATCAATGTTTTGCATCAAAGTTTATCCCAGTTTGGAATTACAGAAGTCTCTCCTGAGAAAAATGTTTTACAAGGGCAGCATGAAGCGGACAAAATCTGGAGCAAAGAAGGATTTTATGCTGTTGTCATTTTTCTCAGCATCTTTGTTATTATAGTAACGTGTTTGATGATTCTTTACAGATTAAAAGAAAGATTTCAGCTTTCCTTAAGACAAGACAAAGAGAAAAACCAGGAGATCCACCTATCGCCCATCACATTACAGCCAGCACTGTCCGAGGCAAAGACAGTCCACAGCATGGTCCAACCTGAGCAGGCCCCAAAGGTACTGAATGTTGTCGTGGACCCTCAAGGCCGAGGTGCTCCTGAGATCAGAGCTACCACCGCTACCTCTGTTTGCCCTTCTCCTTTCAAAATGAAGCCCATAGGACTTCAAGAGAGAAGAGGGTCCAACGTATCTCTTACATTGGACATGAGTAGCTTGGGGAACATTGAACCCTTTGTGTCTATACCAACACCACGGGAGAAGGTAGCAATGGAGTATCTGCAGTCAGCCAGCCGAATTCTCACAAGGTCTCAGCTGAGGGACGTCGTGGCAAGTTCACATTTACTCCAAAGTGAATTCATGGAAATACCAATGAACTTTGTGGATCCCAAAGAAATTGATATTCCGCGTCATGGAACTAAAAATCGCTATAAGACCATTTTACCAAATCCCCTCAGCAGAGTGTGTTTAAGACCAAAAAATGTAACCGATTCATTGAGCACCTACATTAATGCTAATTATATTAGGGGCTACAGTGGCAAGGAGAAAGCCTTCATTGCCACGCAGGGCCCCATGATCAACACCGTGGATGATTTCTGGCAGATGGTTTGGCAGGAAGACAGCCCTGTGATTGTTATGATCACAAAACTCAAAGAAAAAAATGAGAAATGTGTGCTATACTGGCCGGAAAAGAGAGGGATATATGGAAAAGTTGAGGTTCTGGTTATCAGTGTAAATGAATGTGATAACTACACCATTCGAAACCTTGTCTTAAAGCAAGGAAGCCACACCCAACATGTGAAGCATTACTGGTACACCTCATGGCCTGATCACAAGACTCCAGACAGTGCCCAGCCCCTCCTACAGCTCATGCTGGATGTAGAAGAAGACAGACTTGCTTCCCAGGGCCGAGGGCCTGTGGTTGTCCACTGCAGTGCAGGAATAGGTAGAACAGGGTGTTTTATTGCTACATCCATTGGCTGTCAACAGCTGAAAGAAGAAGGAGTTGTGGATGCACTAAGCATTGTCTGCCAGCTTCGTATGGATAGAGGTGGAATGGTGCAAACCAGTGAGCAGTATGAATTTGTGCACCATGCTCTGTGCCTGTATGAGAGCAGACTTTCAGCAGAGACTGTCCAGTGAGTCATTGAAGACTTGTCAGACCATCAATCTCTTGGGGTGATTAATCAAATTACCCACCCAAGGCTTCTAGAAGGAGCTTCCTGCAATGGAAGGAAGGAGAAGCTCTGAAGCCCATGTATGGCATGGATTGTGGAAGACTGGGCAACATATTTAAGATTTCCAGCTCCTTGTGTATATGAATGCATTTGTAAGCATCCCCCAAATTATTCTGAAGGTTTTTTGATGATGGAGGTATGATAGGTTTATCACACAGCCTAAGGCAGATTTTGTTTTGTCTGTACTGACTCTATCTGCCACACAGAATGTATGTATGTAATATTCAGTAATAAATGTCATCAGGTGATGACTGGATGAGCTGCTGAAGACATTCGTATTATGTGTTAGATGCTTTAATGTTTGCAAAATCTGTCTTGTGAATGGACTGTCAGCTGTTAAACTGTTCCTGTTTTGAAGTGCTATTACCTTTCTCAGTTACCAGAATCTTGCTGCTAAAGTTGCAAGTGATTGATAATGGATTTTTAACAGAGAAGTCTTTGTTTTTGAAAAACAAAAATCAAAAACAGTAACTATTTTATATGGAAATGTGTCTTGATAATATTACCTATTAAATGTGTATTTATAGTCCCTCCTATCAAACAATTACAGAGCACAATGATTGTCATTGGGTATATATGTATTTACTCTCTATTATTGGGCATAAAGGTGGCTTCTGCTCCAGAACTCTATCCACTGTATTTCCACATCGTGAGTCATTTTACTTTAAAAGGGAAAAACAAATTTGTAGCAACTCTGAAGTATCAAGAGTTTTAACTACTTGTCTCTCTTTTGCTAAGAAGGGATTTTTGAATATGCTATCTACCTGGAATCTCTCTCTCAACAAAAGGTATATGCCTTCAGGAATGATATAATCTGTCCCATTTTCGAGGCTCCTTATAAGGACATTTCCATGTATGTCCTTACATTTCTGAAAGCTTTCAATCTTCAAGAGCCAAAAAAAATTAAAATAACTACCCTCAGCAAACACTAGCTGTTCTGCTCATATATGAATTTTTAATGCAGCAATGTTGACTTTGTTTCATACTGCCAATAAACTCTTAATACT PRIMER_OPT_SIZE=23 PRIMER_MIN_SIZE=15 PRIMER_MAX_SIZE=26 PRIMER_MISPRIMING_LIBRARY=Human_rep_in_fasta.txt PRIMER_NUM_RETURN=20 PRIMER_NUM_NS_ACCEPTED=1 PRIMER_PRODUCT_SIZE_RANGE=100-999 PRIMER_EXPLAIN_FLAG=1 PRIMER_LEFT_EXPLAIN=considered 39769, GC content failed 975, low tm 19862, high tm 10013, high any compl 10, high end compl 30, high repeat similarity 25, long poly-x seq 129, ok 8725 PRIMER_RIGHT_EXPLAIN=considered 39751, GC content failed 919, low tm 20334, high tm 9523, high any compl 8, high end compl 5, high repeat similarity 8, long poly-x seq 129, ok 8825 PRIMER_PAIR_EXPLAIN=considered 640, unacceptable product size 593, high end compl 4, ok 43 PRIMER_PAIR_PENALTY=0.0369 PRIMER_LEFT_PENALTY=0.015214 PRIMER_RIGHT_PENALTY=0.021648 PRIMER_LEFT_SEQUENCE=GAAGAGGGTCCAACGTATCTCTT PRIMER_RIGHT_SEQUENCE=TAACCAGAACCTCAACTTTTCCA PRIMER_LEFT=1422,23 PRIMER_RIGHT=1973,23 PRIMER_LEFT_TM=60.015 PRIMER_RIGHT_TM=60.022 PRIMER_LEFT_GC_PERCENT=47.826 PRIMER_RIGHT_GC_PERCENT=39.130 PRIMER_LEFT_SELF_ANY=5.00 PRIMER_RIGHT_SELF_ANY=3.00 PRIMER_LEFT_SELF_END=3.00 PRIMER_RIGHT_SELF_END=0.00 PRIMER_LEFT_MISPRIMING_SCORE=12.00, LTR13 LTR from a putative human endogenous retrovirus PRIMER_RIGHT_MISPRIMING_SCORE=12.00, reverse HSATI Human satellite I DNA HinfI fragment PRIMER_PAIR_MISPRIMING_SCORE=20.00, reverse L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_LEFT_END_STABILITY=6.7000 PRIMER_RIGHT_END_STABILITY=8.5000 PRIMER_PAIR_COMPL_ANY=5.00 PRIMER_PAIR_COMPL_END=1.00 PRIMER_PRODUCT_SIZE=552 PRIMER_PAIR_PENALTY_1=0.0814 PRIMER_LEFT_1_PENALTY=0.036623 PRIMER_RIGHT_1_PENALTY=0.044787 PRIMER_LEFT_1_SEQUENCE=GTGCCTGTATGAGAGCAGACTTT PRIMER_RIGHT_1_SEQUENCE=TGACTCACGATGTGGAAATACAG PRIMER_LEFT_1=2347,23 PRIMER_RIGHT_1=3141,23 PRIMER_LEFT_1_TM=59.963 PRIMER_RIGHT_1_TM=60.045 PRIMER_LEFT_1_GC_PERCENT=47.826 PRIMER_RIGHT_1_GC_PERCENT=43.478 PRIMER_LEFT_1_SELF_ANY=3.00 PRIMER_RIGHT_1_SELF_ANY=5.00 PRIMER_LEFT_1_SELF_END=1.00 PRIMER_RIGHT_1_SELF_END=1.00 PRIMER_LEFT_1_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_1_MISPRIMING_SCORE=12.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_PAIR_1_MISPRIMING_SCORE=22.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_1_END_STABILITY=6.7000 PRIMER_RIGHT_1_END_STABILITY=5.7000 PRIMER_PAIR_1_COMPL_ANY=6.00 PRIMER_PAIR_1_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_1=795 PRIMER_PAIR_PENALTY_2=0.0891 PRIMER_LEFT_2_PENALTY=0.021648 PRIMER_RIGHT_2_PENALTY=0.067424 PRIMER_LEFT_2_SEQUENCE=TGGAAAAGTTGAGGTTCTGGTTA PRIMER_RIGHT_2_SEQUENCE=AATACGAATGTCTTCAGCAGCTC PRIMER_LEFT_2=1951,23 PRIMER_RIGHT_2=2764,23 PRIMER_LEFT_2_TM=60.022 PRIMER_RIGHT_2_TM=59.933 PRIMER_LEFT_2_GC_PERCENT=39.130 PRIMER_RIGHT_2_GC_PERCENT=43.478 PRIMER_LEFT_2_SELF_ANY=3.00 PRIMER_RIGHT_2_SELF_ANY=5.00 PRIMER_LEFT_2_SELF_END=2.00 PRIMER_RIGHT_2_SELF_END=3.00 PRIMER_LEFT_2_MISPRIMING_SCORE=11.00, MLT1R MLT1-Mammalian LTR retrotransposon internal sequence - a consensus PRIMER_RIGHT_2_MISPRIMING_SCORE=11.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_2_MISPRIMING_SCORE=21.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_2_END_STABILITY=7.2000 PRIMER_RIGHT_2_END_STABILITY=7.9000 PRIMER_PAIR_2_COMPL_ANY=5.00 PRIMER_PAIR_2_COMPL_END=3.00 PRIMER_PRODUCT_SIZE_2=814 PRIMER_PAIR_PENALTY_3=0.0918 PRIMER_LEFT_3_PENALTY=0.046971 PRIMER_RIGHT_3_PENALTY=0.044787 PRIMER_LEFT_3_SEQUENCE=GTCAACAGCTGAAAGAAGAAGGA PRIMER_RIGHT_3_SEQUENCE=TGACTCACGATGTGGAAATACAG PRIMER_LEFT_3=2229,23 PRIMER_RIGHT_3=3141,23 PRIMER_LEFT_3_TM=60.047 PRIMER_RIGHT_3_TM=60.045 PRIMER_LEFT_3_GC_PERCENT=43.478 PRIMER_RIGHT_3_GC_PERCENT=43.478 PRIMER_LEFT_3_SELF_ANY=6.00 PRIMER_RIGHT_3_SELF_ANY=5.00 PRIMER_LEFT_3_SELF_END=0.00 PRIMER_RIGHT_3_SELF_END=1.00 PRIMER_LEFT_3_MISPRIMING_SCORE=12.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_RIGHT_3_MISPRIMING_SCORE=12.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_PAIR_3_MISPRIMING_SCORE=24.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_LEFT_3_END_STABILITY=8.2000 PRIMER_RIGHT_3_END_STABILITY=5.7000 PRIMER_PAIR_3_COMPL_ANY=5.00 PRIMER_PAIR_3_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_3=913 PRIMER_PAIR_PENALTY_4=0.0950 PRIMER_LEFT_4_PENALTY=0.015214 PRIMER_RIGHT_4_PENALTY=0.079770 PRIMER_LEFT_4_SEQUENCE=GAAGAGGGTCCAACGTATCTCTT PRIMER_RIGHT_4_SEQUENCE=AAGACAAGGTTTCGAATGGTGTA PRIMER_LEFT_4=1422,23 PRIMER_RIGHT_4=2019,23 PRIMER_LEFT_4_TM=60.015 PRIMER_RIGHT_4_TM=59.920 PRIMER_LEFT_4_GC_PERCENT=47.826 PRIMER_RIGHT_4_GC_PERCENT=39.130 PRIMER_LEFT_4_SELF_ANY=5.00 PRIMER_RIGHT_4_SELF_ANY=6.00 PRIMER_LEFT_4_SELF_END=3.00 PRIMER_RIGHT_4_SELF_END=2.00 PRIMER_LEFT_4_MISPRIMING_SCORE=12.00, LTR13 LTR from a putative human endogenous retrovirus PRIMER_RIGHT_4_MISPRIMING_SCORE=12.00, L1MB7 3'-end of L1 repeat (subfamily L1MB7) - a consensus sequence PRIMER_PAIR_4_MISPRIMING_SCORE=21.00, L1MD1 3'-end of L1 repeat (subfamily L1MD1) - a consensus sequence PRIMER_LEFT_4_END_STABILITY=6.7000 PRIMER_RIGHT_4_END_STABILITY=5.4000 PRIMER_PAIR_4_COMPL_ANY=5.00 PRIMER_PAIR_4_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_4=598 PRIMER_PAIR_PENALTY_5=0.0967 PRIMER_LEFT_5_PENALTY=0.081493 PRIMER_RIGHT_5_PENALTY=0.015214 PRIMER_LEFT_5_SEQUENCE=TGACACTGCAAATGGATGTAAAC PRIMER_RIGHT_5_SEQUENCE=AAGAGATACGTTGGACCCTCTTC PRIMER_LEFT_5=771,23 PRIMER_RIGHT_5=1444,23 PRIMER_LEFT_5_TM=59.919 PRIMER_RIGHT_5_TM=60.015 PRIMER_LEFT_5_GC_PERCENT=39.130 PRIMER_RIGHT_5_GC_PERCENT=47.826 PRIMER_LEFT_5_SELF_ANY=4.00 PRIMER_RIGHT_5_SELF_ANY=5.00 PRIMER_LEFT_5_SELF_END=2.00 PRIMER_RIGHT_5_SELF_END=0.00 PRIMER_LEFT_5_MISPRIMING_SCORE=11.00, L1PB1 3'-end of L1 repeat (subfamily L1PB1) - a consensus sequence PRIMER_RIGHT_5_MISPRIMING_SCORE=11.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_5_MISPRIMING_SCORE=21.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_5_END_STABILITY=6.0000 PRIMER_RIGHT_5_END_STABILITY=6.7000 PRIMER_PAIR_5_COMPL_ANY=3.00 PRIMER_PAIR_5_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_5=674 PRIMER_PAIR_PENALTY_6=0.0967 PRIMER_LEFT_6_PENALTY=0.081493 PRIMER_RIGHT_6_PENALTY=0.015214 PRIMER_LEFT_6_SEQUENCE=GTGACACTGCAAATGGATGTAAA PRIMER_RIGHT_6_SEQUENCE=AAGAGATACGTTGGACCCTCTTC PRIMER_LEFT_6=770,23 PRIMER_RIGHT_6=1444,23 PRIMER_LEFT_6_TM=59.919 PRIMER_RIGHT_6_TM=60.015 PRIMER_LEFT_6_GC_PERCENT=39.130 PRIMER_RIGHT_6_GC_PERCENT=47.826 PRIMER_LEFT_6_SELF_ANY=5.00 PRIMER_RIGHT_6_SELF_ANY=5.00 PRIMER_LEFT_6_SELF_END=2.00 PRIMER_RIGHT_6_SELF_END=0.00 PRIMER_LEFT_6_MISPRIMING_SCORE=12.00, reverse MER2 Nonautonomous DNA transposon PRIMER_RIGHT_6_MISPRIMING_SCORE=11.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_6_MISPRIMING_SCORE=20.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_6_END_STABILITY=6.0000 PRIMER_RIGHT_6_END_STABILITY=6.7000 PRIMER_PAIR_6_COMPL_ANY=3.00 PRIMER_PAIR_6_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_6=675 PRIMER_PAIR_PENALTY_7=0.0967 PRIMER_LEFT_7_PENALTY=0.015214 PRIMER_RIGHT_7_PENALTY=0.081493 PRIMER_LEFT_7_SEQUENCE=GAAGAGGGTCCAACGTATCTCTT PRIMER_RIGHT_7_SEQUENCE=TGACTGCAGATACTCCATTGCTA PRIMER_LEFT_7=1422,23 PRIMER_RIGHT_7=1534,23 PRIMER_LEFT_7_TM=60.015 PRIMER_RIGHT_7_TM=59.919 PRIMER_LEFT_7_GC_PERCENT=47.826 PRIMER_RIGHT_7_GC_PERCENT=43.478 PRIMER_LEFT_7_SELF_ANY=5.00 PRIMER_RIGHT_7_SELF_ANY=6.00 PRIMER_LEFT_7_SELF_END=3.00 PRIMER_RIGHT_7_SELF_END=2.00 PRIMER_LEFT_7_MISPRIMING_SCORE=12.00, LTR13 LTR from a putative human endogenous retrovirus PRIMER_RIGHT_7_MISPRIMING_SCORE=11.00, L1MA2 3'-end of L1 repeat (subfamily L1MA2) - a consensus sequence PRIMER_PAIR_7_MISPRIMING_SCORE=20.00, MER4C a consensus PRIMER_LEFT_7_END_STABILITY=6.7000 PRIMER_RIGHT_7_END_STABILITY=7.5000 PRIMER_PAIR_7_COMPL_ANY=6.00 PRIMER_PAIR_7_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_7=113 PRIMER_PAIR_PENALTY_8=0.1040 PRIMER_LEFT_8_PENALTY=0.036623 PRIMER_RIGHT_8_PENALTY=0.067424 PRIMER_LEFT_8_SEQUENCE=GTGCCTGTATGAGAGCAGACTTT PRIMER_RIGHT_8_SEQUENCE=AATACGAATGTCTTCAGCAGCTC PRIMER_LEFT_8=2347,23 PRIMER_RIGHT_8=2764,23 PRIMER_LEFT_8_TM=59.963 PRIMER_RIGHT_8_TM=59.933 PRIMER_LEFT_8_GC_PERCENT=47.826 PRIMER_RIGHT_8_GC_PERCENT=43.478 PRIMER_LEFT_8_SELF_ANY=3.00 PRIMER_RIGHT_8_SELF_ANY=5.00 PRIMER_LEFT_8_SELF_END=1.00 PRIMER_RIGHT_8_SELF_END=3.00 PRIMER_LEFT_8_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_8_MISPRIMING_SCORE=11.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_8_MISPRIMING_SCORE=23.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_8_END_STABILITY=6.7000 PRIMER_RIGHT_8_END_STABILITY=7.9000 PRIMER_PAIR_8_COMPL_ANY=5.00 PRIMER_PAIR_8_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_8=418 PRIMER_PAIR_PENALTY_9=0.1104 PRIMER_LEFT_9_PENALTY=0.021648 PRIMER_RIGHT_9_PENALTY=0.088791 PRIMER_LEFT_9_SEQUENCE=TGGAAAAGTTGAGGTTCTGGTTA PRIMER_RIGHT_9_SEQUENCE=CTTGCAACTTTAGCAGCAAGATT PRIMER_LEFT_9=1951,23 PRIMER_RIGHT_9=2890,23 PRIMER_LEFT_9_TM=60.022 PRIMER_RIGHT_9_TM=60.089 PRIMER_LEFT_9_GC_PERCENT=39.130 PRIMER_RIGHT_9_GC_PERCENT=39.130 PRIMER_LEFT_9_SELF_ANY=3.00 PRIMER_RIGHT_9_SELF_ANY=8.00 PRIMER_LEFT_9_SELF_END=2.00 PRIMER_RIGHT_9_SELF_END=3.00 PRIMER_LEFT_9_MISPRIMING_SCORE=11.00, MLT1R MLT1-Mammalian LTR retrotransposon internal sequence - a consensus PRIMER_RIGHT_9_MISPRIMING_SCORE=12.00, LTR12 LTR from human ERV9 endogenous retroviral sequence (HRES-1/1) PRIMER_PAIR_9_MISPRIMING_SCORE=21.00, PTR5 Human PTR5 mRNA for repetitive sequence PRIMER_LEFT_9_END_STABILITY=7.2000 PRIMER_RIGHT_9_END_STABILITY=6.6000 PRIMER_PAIR_9_COMPL_ANY=7.00 PRIMER_PAIR_9_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_9=940 PRIMER_PAIR_PENALTY_10=0.1144 PRIMER_LEFT_10_PENALTY=0.046971 PRIMER_RIGHT_10_PENALTY=0.067424 PRIMER_LEFT_10_SEQUENCE=GTCAACAGCTGAAAGAAGAAGGA PRIMER_RIGHT_10_SEQUENCE=AATACGAATGTCTTCAGCAGCTC PRIMER_LEFT_10=2229,23 PRIMER_RIGHT_10=2764,23 PRIMER_LEFT_10_TM=60.047 PRIMER_RIGHT_10_TM=59.933 PRIMER_LEFT_10_GC_PERCENT=43.478 PRIMER_RIGHT_10_GC_PERCENT=43.478 PRIMER_LEFT_10_SELF_ANY=6.00 PRIMER_RIGHT_10_SELF_ANY=5.00 PRIMER_LEFT_10_SELF_END=0.00 PRIMER_RIGHT_10_SELF_END=3.00 PRIMER_LEFT_10_MISPRIMING_SCORE=12.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_RIGHT_10_MISPRIMING_SCORE=11.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_10_MISPRIMING_SCORE=23.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_10_END_STABILITY=8.2000 PRIMER_RIGHT_10_END_STABILITY=7.9000 PRIMER_PAIR_10_COMPL_ANY=6.00 PRIMER_PAIR_10_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_10=536 PRIMER_PAIR_PENALTY_11=0.1238 PRIMER_LEFT_11_PENALTY=0.108608 PRIMER_RIGHT_11_PENALTY=0.015214 PRIMER_LEFT_11_SEQUENCE=TTGCATCAAAGTTTATCCCAGTT PRIMER_RIGHT_11_SEQUENCE=AAGAGATACGTTGGACCCTCTTC PRIMER_LEFT_11=995,23 PRIMER_RIGHT_11=1444,23 PRIMER_LEFT_11_TM=59.891 PRIMER_RIGHT_11_TM=60.015 PRIMER_LEFT_11_GC_PERCENT=34.783 PRIMER_RIGHT_11_GC_PERCENT=47.826 PRIMER_LEFT_11_SELF_ANY=5.00 PRIMER_RIGHT_11_SELF_ANY=5.00 PRIMER_LEFT_11_SELF_END=0.00 PRIMER_RIGHT_11_SELF_END=0.00 PRIMER_LEFT_11_MISPRIMING_SCORE=12.00, reverse L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_RIGHT_11_MISPRIMING_SCORE=11.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_11_MISPRIMING_SCORE=22.00, reverse L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_LEFT_11_END_STABILITY=6.7000 PRIMER_RIGHT_11_END_STABILITY=6.7000 PRIMER_PAIR_11_COMPL_ANY=5.00 PRIMER_PAIR_11_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_11=450 PRIMER_PAIR_PENALTY_12=0.1238 PRIMER_LEFT_12_PENALTY=0.108608 PRIMER_RIGHT_12_PENALTY=0.015214 PRIMER_LEFT_12_SEQUENCE=TGCATCAAAGTTTATCCCAGTTT PRIMER_RIGHT_12_SEQUENCE=AAGAGATACGTTGGACCCTCTTC PRIMER_LEFT_12=996,23 PRIMER_RIGHT_12=1444,23 PRIMER_LEFT_12_TM=59.891 PRIMER_RIGHT_12_TM=60.015 PRIMER_LEFT_12_GC_PERCENT=34.783 PRIMER_RIGHT_12_GC_PERCENT=47.826 PRIMER_LEFT_12_SELF_ANY=5.00 PRIMER_RIGHT_12_SELF_ANY=5.00 PRIMER_LEFT_12_SELF_END=0.00 PRIMER_RIGHT_12_SELF_END=0.00 PRIMER_LEFT_12_MISPRIMING_SCORE=12.00, reverse L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_RIGHT_12_MISPRIMING_SCORE=11.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_12_MISPRIMING_SCORE=22.00, reverse L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_LEFT_12_END_STABILITY=6.7000 PRIMER_RIGHT_12_END_STABILITY=6.7000 PRIMER_PAIR_12_COMPL_ANY=5.00 PRIMER_PAIR_12_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_12=449 PRIMER_PAIR_PENALTY_13=0.1238 PRIMER_LEFT_13_PENALTY=0.108608 PRIMER_RIGHT_13_PENALTY=0.015214 PRIMER_LEFT_13_SEQUENCE=TTTGCATCAAAGTTTATCCCAGT PRIMER_RIGHT_13_SEQUENCE=AAGAGATACGTTGGACCCTCTTC PRIMER_LEFT_13=994,23 PRIMER_RIGHT_13=1444,23 PRIMER_LEFT_13_TM=59.891 PRIMER_RIGHT_13_TM=60.015 PRIMER_LEFT_13_GC_PERCENT=34.783 PRIMER_RIGHT_13_GC_PERCENT=47.826 PRIMER_LEFT_13_SELF_ANY=6.00 PRIMER_RIGHT_13_SELF_ANY=5.00 PRIMER_LEFT_13_SELF_END=1.00 PRIMER_RIGHT_13_SELF_END=0.00 PRIMER_LEFT_13_MISPRIMING_SCORE=11.00, MER42a MER42 repetitive sequence: subfamily MER42a - a consensus PRIMER_RIGHT_13_MISPRIMING_SCORE=11.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_13_MISPRIMING_SCORE=21.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_13_END_STABILITY=7.9000 PRIMER_RIGHT_13_END_STABILITY=6.7000 PRIMER_PAIR_13_COMPL_ANY=5.00 PRIMER_PAIR_13_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_13=451 PRIMER_PAIR_PENALTY_14=0.1238 PRIMER_LEFT_14_PENALTY=0.108608 PRIMER_RIGHT_14_PENALTY=0.015214 PRIMER_LEFT_14_SEQUENCE=GCATCAAAGTTTATCCCAGTTTG PRIMER_RIGHT_14_SEQUENCE=AAGAGATACGTTGGACCCTCTTC PRIMER_LEFT_14=997,23 PRIMER_RIGHT_14=1444,23 PRIMER_LEFT_14_TM=59.891 PRIMER_RIGHT_14_TM=60.015 PRIMER_LEFT_14_GC_PERCENT=39.130 PRIMER_RIGHT_14_GC_PERCENT=47.826 PRIMER_LEFT_14_SELF_ANY=5.00 PRIMER_RIGHT_14_SELF_ANY=5.00 PRIMER_LEFT_14_SELF_END=2.00 PRIMER_RIGHT_14_SELF_END=0.00 PRIMER_LEFT_14_MISPRIMING_SCORE=12.00, reverse L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_RIGHT_14_MISPRIMING_SCORE=11.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_14_MISPRIMING_SCORE=22.00, reverse L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_LEFT_14_END_STABILITY=7.0000 PRIMER_RIGHT_14_END_STABILITY=6.7000 PRIMER_PAIR_14_COMPL_ANY=5.00 PRIMER_PAIR_14_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_14=448 PRIMER_PAIR_PENALTY_15=0.1241 PRIMER_LEFT_15_PENALTY=0.102474 PRIMER_RIGHT_15_PENALTY=0.021648 PRIMER_LEFT_15_SEQUENCE=TTATATTAGGGGCTACAGTGGCA PRIMER_RIGHT_15_SEQUENCE=TAACCAGAACCTCAACTTTTCCA PRIMER_LEFT_15=1765,23 PRIMER_RIGHT_15=1973,23 PRIMER_LEFT_15_TM=59.898 PRIMER_RIGHT_15_TM=60.022 PRIMER_LEFT_15_GC_PERCENT=43.478 PRIMER_RIGHT_15_GC_PERCENT=39.130 PRIMER_LEFT_15_SELF_ANY=5.00 PRIMER_RIGHT_15_SELF_ANY=3.00 PRIMER_LEFT_15_SELF_END=3.00 PRIMER_RIGHT_15_SELF_END=0.00 PRIMER_LEFT_15_MISPRIMING_SCORE=12.00, reverse L1PA15 3'-end of L1 repeat (subfamily L1PA15) - a consensus sequence PRIMER_RIGHT_15_MISPRIMING_SCORE=12.00, reverse HSATI Human satellite I DNA HinfI fragment PRIMER_PAIR_15_MISPRIMING_SCORE=21.00, reverse L1PB3 3'-end of L1 repeat (subfamily L1PB3) - a consensus sequence PRIMER_LEFT_15_END_STABILITY=10.0000 PRIMER_RIGHT_15_END_STABILITY=8.5000 PRIMER_PAIR_15_COMPL_ANY=3.00 PRIMER_PAIR_15_COMPL_END=3.00 PRIMER_PRODUCT_SIZE_15=209 PRIMER_PAIR_PENALTY_16=0.1254 PRIMER_LEFT_16_PENALTY=0.036623 PRIMER_RIGHT_16_PENALTY=0.088791 PRIMER_LEFT_16_SEQUENCE=GTGCCTGTATGAGAGCAGACTTT PRIMER_RIGHT_16_SEQUENCE=CTTGCAACTTTAGCAGCAAGATT PRIMER_LEFT_16=2347,23 PRIMER_RIGHT_16=2890,23 PRIMER_LEFT_16_TM=59.963 PRIMER_RIGHT_16_TM=60.089 PRIMER_LEFT_16_GC_PERCENT=47.826 PRIMER_RIGHT_16_GC_PERCENT=39.130 PRIMER_LEFT_16_SELF_ANY=3.00 PRIMER_RIGHT_16_SELF_ANY=8.00 PRIMER_LEFT_16_SELF_END=1.00 PRIMER_RIGHT_16_SELF_END=3.00 PRIMER_LEFT_16_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_16_MISPRIMING_SCORE=12.00, LTR12 LTR from human ERV9 endogenous retroviral sequence (HRES-1/1) PRIMER_PAIR_16_MISPRIMING_SCORE=21.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_16_END_STABILITY=6.7000 PRIMER_RIGHT_16_END_STABILITY=6.6000 PRIMER_PAIR_16_COMPL_ANY=3.00 PRIMER_PAIR_16_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_16=544 PRIMER_PAIR_PENALTY_17=0.1303 PRIMER_LEFT_17_PENALTY=0.108608 PRIMER_RIGHT_17_PENALTY=0.021648 PRIMER_LEFT_17_SEQUENCE=TGCATCAAAGTTTATCCCAGTTT PRIMER_RIGHT_17_SEQUENCE=TAACCAGAACCTCAACTTTTCCA PRIMER_LEFT_17=996,23 PRIMER_RIGHT_17=1973,23 PRIMER_LEFT_17_TM=59.891 PRIMER_RIGHT_17_TM=60.022 PRIMER_LEFT_17_GC_PERCENT=34.783 PRIMER_RIGHT_17_GC_PERCENT=39.130 PRIMER_LEFT_17_SELF_ANY=5.00 PRIMER_RIGHT_17_SELF_ANY=3.00 PRIMER_LEFT_17_SELF_END=0.00 PRIMER_RIGHT_17_SELF_END=0.00 PRIMER_LEFT_17_MISPRIMING_SCORE=12.00, reverse L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_RIGHT_17_MISPRIMING_SCORE=12.00, reverse HSATI Human satellite I DNA HinfI fragment PRIMER_PAIR_17_MISPRIMING_SCORE=22.00, reverse L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_LEFT_17_END_STABILITY=6.7000 PRIMER_RIGHT_17_END_STABILITY=8.5000 PRIMER_PAIR_17_COMPL_ANY=6.00 PRIMER_PAIR_17_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_17=978 PRIMER_PAIR_PENALTY_18=0.1303 PRIMER_LEFT_18_PENALTY=0.108608 PRIMER_RIGHT_18_PENALTY=0.021648 PRIMER_LEFT_18_SEQUENCE=TTGCATCAAAGTTTATCCCAGTT PRIMER_RIGHT_18_SEQUENCE=TAACCAGAACCTCAACTTTTCCA PRIMER_LEFT_18=995,23 PRIMER_RIGHT_18=1973,23 PRIMER_LEFT_18_TM=59.891 PRIMER_RIGHT_18_TM=60.022 PRIMER_LEFT_18_GC_PERCENT=34.783 PRIMER_RIGHT_18_GC_PERCENT=39.130 PRIMER_LEFT_18_SELF_ANY=5.00 PRIMER_RIGHT_18_SELF_ANY=3.00 PRIMER_LEFT_18_SELF_END=0.00 PRIMER_RIGHT_18_SELF_END=0.00 PRIMER_LEFT_18_MISPRIMING_SCORE=12.00, reverse L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_RIGHT_18_MISPRIMING_SCORE=12.00, reverse HSATI Human satellite I DNA HinfI fragment PRIMER_PAIR_18_MISPRIMING_SCORE=22.00, reverse L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_LEFT_18_END_STABILITY=6.7000 PRIMER_RIGHT_18_END_STABILITY=8.5000 PRIMER_PAIR_18_COMPL_ANY=6.00 PRIMER_PAIR_18_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_18=979 PRIMER_PAIR_PENALTY_19=0.1303 PRIMER_LEFT_19_PENALTY=0.108608 PRIMER_RIGHT_19_PENALTY=0.021648 PRIMER_LEFT_19_SEQUENCE=TTTGCATCAAAGTTTATCCCAGT PRIMER_RIGHT_19_SEQUENCE=TAACCAGAACCTCAACTTTTCCA PRIMER_LEFT_19=994,23 PRIMER_RIGHT_19=1973,23 PRIMER_LEFT_19_TM=59.891 PRIMER_RIGHT_19_TM=60.022 PRIMER_LEFT_19_GC_PERCENT=34.783 PRIMER_RIGHT_19_GC_PERCENT=39.130 PRIMER_LEFT_19_SELF_ANY=6.00 PRIMER_RIGHT_19_SELF_ANY=3.00 PRIMER_LEFT_19_SELF_END=1.00 PRIMER_RIGHT_19_SELF_END=0.00 PRIMER_LEFT_19_MISPRIMING_SCORE=11.00, MER42a MER42 repetitive sequence: subfamily MER42a - a consensus PRIMER_RIGHT_19_MISPRIMING_SCORE=12.00, reverse HSATI Human satellite I DNA HinfI fragment PRIMER_PAIR_19_MISPRIMING_SCORE=21.00, reverse L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_LEFT_19_END_STABILITY=7.9000 PRIMER_RIGHT_19_END_STABILITY=8.5000 PRIMER_PAIR_19_COMPL_ANY=6.00 PRIMER_PAIR_19_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_19=980 =