PRIMER_SEQUENCE_ID=NM_005608 SEQUENCE=ACTTCTCGCTCGACACAGCCAGAGCTGGAGGTGGGTGCCCGGCACGGAGGGGCCTGCGGACCAATGGCTCTGCCCTGCACCTTAGGGCTCGGGATGCTGCTGGCCCTGCCAGGGGCCTTGGGCTCGGGTGGCAGCGCGGAGGACAGCGTGGGCTCCAGCTCTGTCACCGTTGTCCTGCTGCTGCTGCTGCTCCTACTGCTGGCCACTGGCCTAGCACTGGCCTGGCGCCGCCTCAGCCGTGACTCAGGGGGCTACTACCACCCGGCCCGCCTAGGTGCCGCGCTGTGGGGCCGCACGCGGCGCCTGCTCTGGGCCAGCCCCCCAGGTCGCTGGCTGCAGGCCCGAGCTGAGCTGGGGTCCACAGACAATGACCTTGAGCGACAGGAGGATGAGCAGGACACAGACTATGACCACGTCGCGGATGGTGGCCTGCAGGCTGACCCTGGGGAAGGCGAGCAGCAATGTGGAGAGGCGTCCAGCCCAGAGCAGGTCCCCGTGCGGGCTGAGGAAGCCAGAGACAGTGACACGGAGGGCGACCTGGTCCTCGGCTCCCCAGGACCAGCGAGCGCAGGGGGCAGTGCTGAGGCCCTGCTGAGTGACCTGCACGCCTTTGCTGGCAGCGCAGCCTGGGATGACAGCGCCAGGGCAGCTGGGGGCCAGGGCCTCCATGTCACCGCACTGTAGAGGCCGGTCTTGGTGTCCCATCCCTGTCACAGCCGCTCACTCCCCGTGCCTCTGCTTCCCAAGATGCCATGGCTGGACTGGACCCCCAGCCCACATGACCATGCCTCAGACTGTCACCCCTACCAGTTCCCAAGTCCATGTGTACCCCGCTCACCACGGGAACGGCCCCCCCCAACCACAGGCATCAGGCAACCATTTGAAATAAAACTCCTTCAGCCTGTGAAAAAAAAAA PRIMER_OPT_SIZE=23 PRIMER_MIN_SIZE=15 PRIMER_MAX_SIZE=26 PRIMER_MISPRIMING_LIBRARY=Human_rep_in_fasta.txt PRIMER_NUM_RETURN=20 PRIMER_NUM_NS_ACCEPTED=1 PRIMER_PRODUCT_SIZE_RANGE=100-999 PRIMER_EXPLAIN_FLAG=1 PRIMER_LEFT_EXPLAIN=considered 9654, GC content failed 763, low tm 1167, high tm 6322, high end compl 17, high repeat similarity 14, long poly-x seq 20, ok 1351 PRIMER_RIGHT_EXPLAIN=considered 9457, GC content failed 676, low tm 1309, high tm 5994, high end compl 2, high repeat similarity 11, long poly-x seq 57, ok 1408 PRIMER_PAIR_EXPLAIN=considered 96, unacceptable product size 45, high end compl 2, ok 49 PRIMER_PAIR_PENALTY=0.7086 PRIMER_LEFT_PENALTY=0.483814 PRIMER_RIGHT_PENALTY=0.224760 PRIMER_LEFT_SEQUENCE=AGGACACAGACTATGACCACGTC PRIMER_RIGHT_SEQUENCE=GTTTTATTTCAAATGGTTGCCTG PRIMER_LEFT=394,23 PRIMER_RIGHT=891,23 PRIMER_LEFT_TM=60.484 PRIMER_RIGHT_TM=59.775 PRIMER_LEFT_GC_PERCENT=52.174 PRIMER_RIGHT_GC_PERCENT=34.783 PRIMER_LEFT_SELF_ANY=7.00 PRIMER_RIGHT_SELF_ANY=7.00 PRIMER_LEFT_SELF_END=3.00 PRIMER_RIGHT_SELF_END=1.00 PRIMER_LEFT_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_MISPRIMING_SCORE=11.00, reverse MER39 a consensus PRIMER_PAIR_MISPRIMING_SCORE=22.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_END_STABILITY=7.8000 PRIMER_RIGHT_END_STABILITY=9.7000 PRIMER_PAIR_COMPL_ANY=4.00 PRIMER_PAIR_COMPL_END=1.00 PRIMER_PRODUCT_SIZE=498 PRIMER_PAIR_PENALTY_1=0.7433 PRIMER_LEFT_1_PENALTY=0.483814 PRIMER_RIGHT_1_PENALTY=0.259475 PRIMER_LEFT_1_SEQUENCE=AGGACACAGACTATGACCACGTC PRIMER_RIGHT_1_SEQUENCE=TTTATTTCAAATGGTTGCCTGAT PRIMER_LEFT_1=394,23 PRIMER_RIGHT_1=889,23 PRIMER_LEFT_1_TM=60.484 PRIMER_RIGHT_1_TM=59.741 PRIMER_LEFT_1_GC_PERCENT=52.174 PRIMER_RIGHT_1_GC_PERCENT=30.435 PRIMER_LEFT_1_SELF_ANY=7.00 PRIMER_RIGHT_1_SELF_ANY=7.00 PRIMER_LEFT_1_SELF_END=3.00 PRIMER_RIGHT_1_SELF_END=2.00 PRIMER_LEFT_1_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_1_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_1_MISPRIMING_SCORE=24.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_1_END_STABILITY=7.8000 PRIMER_RIGHT_1_END_STABILITY=6.6000 PRIMER_PAIR_1_COMPL_ANY=4.00 PRIMER_PAIR_1_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_1=496 PRIMER_PAIR_PENALTY_2=0.7589 PRIMER_LEFT_2_PENALTY=0.483814 PRIMER_RIGHT_2_PENALTY=0.275037 PRIMER_LEFT_2_SEQUENCE=AGGACACAGACTATGACCACGTC PRIMER_RIGHT_2_SEQUENCE=TTTCACAGGCTGAAGGAGTTTTA PRIMER_LEFT_2=394,23 PRIMER_RIGHT_2=908,23 PRIMER_LEFT_2_TM=60.484 PRIMER_RIGHT_2_TM=60.275 PRIMER_LEFT_2_GC_PERCENT=52.174 PRIMER_RIGHT_2_GC_PERCENT=39.130 PRIMER_LEFT_2_SELF_ANY=7.00 PRIMER_RIGHT_2_SELF_ANY=5.00 PRIMER_LEFT_2_SELF_END=3.00 PRIMER_RIGHT_2_SELF_END=2.00 PRIMER_LEFT_2_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_2_MISPRIMING_SCORE=11.00, L1MC2 3'-end of L1 repeat (subfamily L1MC2) - a consensus sequence PRIMER_PAIR_2_MISPRIMING_SCORE=20.00, L1MC2 3'-end of L1 repeat (subfamily L1MC2) - a consensus sequence PRIMER_LEFT_2_END_STABILITY=7.8000 PRIMER_RIGHT_2_END_STABILITY=6.6000 PRIMER_PAIR_2_COMPL_ANY=6.00 PRIMER_PAIR_2_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_2=515 PRIMER_PAIR_PENALTY_3=1.1530 PRIMER_LEFT_3_PENALTY=0.483814 PRIMER_RIGHT_3_PENALTY=0.669147 PRIMER_LEFT_3_SEQUENCE=AGGACACAGACTATGACCACGTC PRIMER_RIGHT_3_SEQUENCE=TTTTATTTCAAATGGTTGCCTGA PRIMER_LEFT_3=394,23 PRIMER_RIGHT_3=890,23 PRIMER_LEFT_3_TM=60.484 PRIMER_RIGHT_3_TM=60.669 PRIMER_LEFT_3_GC_PERCENT=52.174 PRIMER_RIGHT_3_GC_PERCENT=30.435 PRIMER_LEFT_3_SELF_ANY=7.00 PRIMER_RIGHT_3_SELF_ANY=7.00 PRIMER_LEFT_3_SELF_END=3.00 PRIMER_RIGHT_3_SELF_END=1.00 PRIMER_LEFT_3_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_3_MISPRIMING_SCORE=11.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_3_MISPRIMING_SCORE=23.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_3_END_STABILITY=7.8000 PRIMER_RIGHT_3_END_STABILITY=8.2000 PRIMER_PAIR_3_COMPL_ANY=4.00 PRIMER_PAIR_3_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_3=497 PRIMER_PAIR_PENALTY_4=1.1672 PRIMER_LEFT_4_PENALTY=0.483814 PRIMER_RIGHT_4_PENALTY=0.683365 PRIMER_LEFT_4_SEQUENCE=AGGACACAGACTATGACCACGTC PRIMER_RIGHT_4_SEQUENCE=TTCACAGGCTGAAGGAGTTTTAT PRIMER_LEFT_4=394,23 PRIMER_RIGHT_4=907,23 PRIMER_LEFT_4_TM=60.484 PRIMER_RIGHT_4_TM=59.317 PRIMER_LEFT_4_GC_PERCENT=52.174 PRIMER_RIGHT_4_GC_PERCENT=39.130 PRIMER_LEFT_4_SELF_ANY=7.00 PRIMER_RIGHT_4_SELF_ANY=5.00 PRIMER_LEFT_4_SELF_END=3.00 PRIMER_RIGHT_4_SELF_END=2.00 PRIMER_LEFT_4_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_4_MISPRIMING_SCORE=12.00, MER7B Nonautonomous DNA transposon PRIMER_PAIR_4_MISPRIMING_SCORE=21.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_4_END_STABILITY=7.8000 PRIMER_RIGHT_4_END_STABILITY=6.2000 PRIMER_PAIR_4_COMPL_ANY=6.00 PRIMER_PAIR_4_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_4=514 PRIMER_PAIR_PENALTY_5=1.5561 PRIMER_LEFT_5_PENALTY=1.281044 PRIMER_RIGHT_5_PENALTY=0.275037 PRIMER_LEFT_5_SEQUENCE=CTACCAGTTCCCAAGTCCATGT PRIMER_RIGHT_5_SEQUENCE=TTTCACAGGCTGAAGGAGTTTTA PRIMER_LEFT_5=803,22 PRIMER_RIGHT_5=908,23 PRIMER_LEFT_5_TM=60.281 PRIMER_RIGHT_5_TM=60.275 PRIMER_LEFT_5_GC_PERCENT=50.000 PRIMER_RIGHT_5_GC_PERCENT=39.130 PRIMER_LEFT_5_SELF_ANY=4.00 PRIMER_RIGHT_5_SELF_ANY=5.00 PRIMER_LEFT_5_SELF_END=2.00 PRIMER_RIGHT_5_SELF_END=2.00 PRIMER_LEFT_5_MISPRIMING_SCORE=12.00, MER21B a consensus PRIMER_RIGHT_5_MISPRIMING_SCORE=11.00, L1MC2 3'-end of L1 repeat (subfamily L1MC2) - a consensus sequence PRIMER_PAIR_5_MISPRIMING_SCORE=21.00, reverse MLT1R MLT1-Mammalian LTR retrotransposon internal sequence - a consensus PRIMER_LEFT_5_END_STABILITY=6.6000 PRIMER_RIGHT_5_END_STABILITY=6.6000 PRIMER_PAIR_5_COMPL_ANY=4.00 PRIMER_PAIR_5_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_5=106 PRIMER_PAIR_PENALTY_6=1.6373 PRIMER_LEFT_6_PENALTY=1.377832 PRIMER_RIGHT_6_PENALTY=0.259475 PRIMER_LEFT_6_SEQUENCE=GTCCACAGACAATGACCTTGAG PRIMER_RIGHT_6_SEQUENCE=TTTATTTCAAATGGTTGCCTGAT PRIMER_LEFT_6=356,22 PRIMER_RIGHT_6=889,23 PRIMER_LEFT_6_TM=59.622 PRIMER_RIGHT_6_TM=59.741 PRIMER_LEFT_6_GC_PERCENT=50.000 PRIMER_RIGHT_6_GC_PERCENT=30.435 PRIMER_LEFT_6_SELF_ANY=5.00 PRIMER_RIGHT_6_SELF_ANY=7.00 PRIMER_LEFT_6_SELF_END=2.00 PRIMER_RIGHT_6_SELF_END=2.00 PRIMER_LEFT_6_MISPRIMING_SCORE=12.00, MER34 a consensus PRIMER_RIGHT_6_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_6_MISPRIMING_SCORE=22.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_6_END_STABILITY=7.0000 PRIMER_RIGHT_6_END_STABILITY=6.6000 PRIMER_PAIR_6_COMPL_ANY=5.00 PRIMER_PAIR_6_COMPL_END=3.00 PRIMER_PRODUCT_SIZE_6=534 PRIMER_PAIR_PENALTY_7=1.6529 PRIMER_LEFT_7_PENALTY=1.377832 PRIMER_RIGHT_7_PENALTY=0.275037 PRIMER_LEFT_7_SEQUENCE=GTCCACAGACAATGACCTTGAG PRIMER_RIGHT_7_SEQUENCE=TTTCACAGGCTGAAGGAGTTTTA PRIMER_LEFT_7=356,22 PRIMER_RIGHT_7=908,23 PRIMER_LEFT_7_TM=59.622 PRIMER_RIGHT_7_TM=60.275 PRIMER_LEFT_7_GC_PERCENT=50.000 PRIMER_RIGHT_7_GC_PERCENT=39.130 PRIMER_LEFT_7_SELF_ANY=5.00 PRIMER_RIGHT_7_SELF_ANY=5.00 PRIMER_LEFT_7_SELF_END=2.00 PRIMER_RIGHT_7_SELF_END=2.00 PRIMER_LEFT_7_MISPRIMING_SCORE=12.00, MER34 a consensus PRIMER_RIGHT_7_MISPRIMING_SCORE=11.00, L1MC2 3'-end of L1 repeat (subfamily L1MC2) - a consensus sequence PRIMER_PAIR_7_MISPRIMING_SCORE=20.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_LEFT_7_END_STABILITY=7.0000 PRIMER_RIGHT_7_END_STABILITY=6.6000 PRIMER_PAIR_7_COMPL_ANY=5.00 PRIMER_PAIR_7_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_7=553 PRIMER_PAIR_PENALTY_8=1.6849 PRIMER_LEFT_8_PENALTY=1.460175 PRIMER_RIGHT_8_PENALTY=0.224760 PRIMER_LEFT_8_SEQUENCE=CAGACTGTCACCCCTACCAGTT PRIMER_RIGHT_8_SEQUENCE=GTTTTATTTCAAATGGTTGCCTG PRIMER_LEFT_8=790,22 PRIMER_RIGHT_8=891,23 PRIMER_LEFT_8_TM=60.460 PRIMER_RIGHT_8_TM=59.775 PRIMER_LEFT_8_GC_PERCENT=54.545 PRIMER_RIGHT_8_GC_PERCENT=34.783 PRIMER_LEFT_8_SELF_ANY=5.00 PRIMER_RIGHT_8_SELF_ANY=7.00 PRIMER_LEFT_8_SELF_END=1.00 PRIMER_RIGHT_8_SELF_END=1.00 PRIMER_LEFT_8_MISPRIMING_SCORE=11.00, L1PB3 3'-end of L1 repeat (subfamily L1PB3) - a consensus sequence PRIMER_RIGHT_8_MISPRIMING_SCORE=11.00, reverse MER39 a consensus PRIMER_PAIR_8_MISPRIMING_SCORE=20.00, L1PB3 3'-end of L1 repeat (subfamily L1PB3) - a consensus sequence PRIMER_LEFT_8_END_STABILITY=6.7000 PRIMER_RIGHT_8_END_STABILITY=9.7000 PRIMER_PAIR_8_COMPL_ANY=5.00 PRIMER_PAIR_8_COMPL_END=3.00 PRIMER_PRODUCT_SIZE_8=102 PRIMER_PAIR_PENALTY_9=1.6968 PRIMER_LEFT_9_PENALTY=1.472052 PRIMER_RIGHT_9_PENALTY=0.224760 PRIMER_LEFT_9_SEQUENCE=AGACTGTCACCCCTACCAGTTC PRIMER_RIGHT_9_SEQUENCE=GTTTTATTTCAAATGGTTGCCTG PRIMER_LEFT_9=791,22 PRIMER_RIGHT_9=891,23 PRIMER_LEFT_9_TM=59.528 PRIMER_RIGHT_9_TM=59.775 PRIMER_LEFT_9_GC_PERCENT=54.545 PRIMER_RIGHT_9_GC_PERCENT=34.783 PRIMER_LEFT_9_SELF_ANY=5.00 PRIMER_RIGHT_9_SELF_ANY=7.00 PRIMER_LEFT_9_SELF_END=0.00 PRIMER_RIGHT_9_SELF_END=1.00 PRIMER_LEFT_9_MISPRIMING_SCORE=12.00, reverse LTR13 LTR from a putative human endogenous retrovirus PRIMER_RIGHT_9_MISPRIMING_SCORE=11.00, reverse MER39 a consensus PRIMER_PAIR_9_MISPRIMING_SCORE=21.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_9_END_STABILITY=6.4000 PRIMER_RIGHT_9_END_STABILITY=9.7000 PRIMER_PAIR_9_COMPL_ANY=5.00 PRIMER_PAIR_9_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_9=101 PRIMER_PAIR_PENALTY_10=1.7196 PRIMER_LEFT_10_PENALTY=1.460175 PRIMER_RIGHT_10_PENALTY=0.259475 PRIMER_LEFT_10_SEQUENCE=CAGACTGTCACCCCTACCAGTT PRIMER_RIGHT_10_SEQUENCE=TTTATTTCAAATGGTTGCCTGAT PRIMER_LEFT_10=790,22 PRIMER_RIGHT_10=889,23 PRIMER_LEFT_10_TM=60.460 PRIMER_RIGHT_10_TM=59.741 PRIMER_LEFT_10_GC_PERCENT=54.545 PRIMER_RIGHT_10_GC_PERCENT=30.435 PRIMER_LEFT_10_SELF_ANY=5.00 PRIMER_RIGHT_10_SELF_ANY=7.00 PRIMER_LEFT_10_SELF_END=1.00 PRIMER_RIGHT_10_SELF_END=2.00 PRIMER_LEFT_10_MISPRIMING_SCORE=11.00, L1PB3 3'-end of L1 repeat (subfamily L1PB3) - a consensus sequence PRIMER_RIGHT_10_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_10_MISPRIMING_SCORE=22.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_10_END_STABILITY=6.7000 PRIMER_RIGHT_10_END_STABILITY=6.6000 PRIMER_PAIR_10_COMPL_ANY=5.00 PRIMER_PAIR_10_COMPL_END=3.00 PRIMER_PRODUCT_SIZE_10=100 PRIMER_PAIR_PENALTY_11=1.7206 PRIMER_LEFT_11_PENALTY=1.495790 PRIMER_RIGHT_11_PENALTY=0.224760 PRIMER_LEFT_11_SEQUENCE=GGACACAGACTATGACCACGTC PRIMER_RIGHT_11_SEQUENCE=GTTTTATTTCAAATGGTTGCCTG PRIMER_LEFT_11=395,22 PRIMER_RIGHT_11=891,23 PRIMER_LEFT_11_TM=59.504 PRIMER_RIGHT_11_TM=59.775 PRIMER_LEFT_11_GC_PERCENT=54.545 PRIMER_RIGHT_11_GC_PERCENT=34.783 PRIMER_LEFT_11_SELF_ANY=7.00 PRIMER_RIGHT_11_SELF_ANY=7.00 PRIMER_LEFT_11_SELF_END=3.00 PRIMER_RIGHT_11_SELF_END=1.00 PRIMER_LEFT_11_MISPRIMING_SCORE=12.00, MER6 Nonautonomous DNA transposon PRIMER_RIGHT_11_MISPRIMING_SCORE=11.00, reverse MER39 a consensus PRIMER_PAIR_11_MISPRIMING_SCORE=21.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_11_END_STABILITY=7.8000 PRIMER_RIGHT_11_END_STABILITY=9.7000 PRIMER_PAIR_11_COMPL_ANY=4.00 PRIMER_PAIR_11_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_11=497 PRIMER_PAIR_PENALTY_12=1.7352 PRIMER_LEFT_12_PENALTY=1.460175 PRIMER_RIGHT_12_PENALTY=0.275037 PRIMER_LEFT_12_SEQUENCE=CAGACTGTCACCCCTACCAGTT PRIMER_RIGHT_12_SEQUENCE=TTTCACAGGCTGAAGGAGTTTTA PRIMER_LEFT_12=790,22 PRIMER_RIGHT_12=908,23 PRIMER_LEFT_12_TM=60.460 PRIMER_RIGHT_12_TM=60.275 PRIMER_LEFT_12_GC_PERCENT=54.545 PRIMER_RIGHT_12_GC_PERCENT=39.130 PRIMER_LEFT_12_SELF_ANY=5.00 PRIMER_RIGHT_12_SELF_ANY=5.00 PRIMER_LEFT_12_SELF_END=1.00 PRIMER_RIGHT_12_SELF_END=2.00 PRIMER_LEFT_12_MISPRIMING_SCORE=11.00, L1PB3 3'-end of L1 repeat (subfamily L1PB3) - a consensus sequence PRIMER_RIGHT_12_MISPRIMING_SCORE=11.00, L1MC2 3'-end of L1 repeat (subfamily L1MC2) - a consensus sequence PRIMER_PAIR_12_MISPRIMING_SCORE=20.00, reverse MER34 a consensus PRIMER_LEFT_12_END_STABILITY=6.7000 PRIMER_RIGHT_12_END_STABILITY=6.6000 PRIMER_PAIR_12_COMPL_ANY=6.00 PRIMER_PAIR_12_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_12=119 PRIMER_PAIR_PENALTY_13=1.7471 PRIMER_LEFT_13_PENALTY=1.472052 PRIMER_RIGHT_13_PENALTY=0.275037 PRIMER_LEFT_13_SEQUENCE=AGACTGTCACCCCTACCAGTTC PRIMER_RIGHT_13_SEQUENCE=TTTCACAGGCTGAAGGAGTTTTA PRIMER_LEFT_13=791,22 PRIMER_RIGHT_13=908,23 PRIMER_LEFT_13_TM=59.528 PRIMER_RIGHT_13_TM=60.275 PRIMER_LEFT_13_GC_PERCENT=54.545 PRIMER_RIGHT_13_GC_PERCENT=39.130 PRIMER_LEFT_13_SELF_ANY=5.00 PRIMER_RIGHT_13_SELF_ANY=5.00 PRIMER_LEFT_13_SELF_END=0.00 PRIMER_RIGHT_13_SELF_END=2.00 PRIMER_LEFT_13_MISPRIMING_SCORE=12.00, reverse LTR13 LTR from a putative human endogenous retrovirus PRIMER_RIGHT_13_MISPRIMING_SCORE=11.00, L1MC2 3'-end of L1 repeat (subfamily L1MC2) - a consensus sequence PRIMER_PAIR_13_MISPRIMING_SCORE=20.00, reverse MER25 Older LINE1 5' end region - a consensus PRIMER_LEFT_13_END_STABILITY=6.4000 PRIMER_RIGHT_13_END_STABILITY=6.6000 PRIMER_PAIR_13_COMPL_ANY=5.00 PRIMER_PAIR_13_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_13=118 PRIMER_PAIR_PENALTY_14=1.7553 PRIMER_LEFT_14_PENALTY=1.495790 PRIMER_RIGHT_14_PENALTY=0.259475 PRIMER_LEFT_14_SEQUENCE=GGACACAGACTATGACCACGTC PRIMER_RIGHT_14_SEQUENCE=TTTATTTCAAATGGTTGCCTGAT PRIMER_LEFT_14=395,22 PRIMER_RIGHT_14=889,23 PRIMER_LEFT_14_TM=59.504 PRIMER_RIGHT_14_TM=59.741 PRIMER_LEFT_14_GC_PERCENT=54.545 PRIMER_RIGHT_14_GC_PERCENT=30.435 PRIMER_LEFT_14_SELF_ANY=7.00 PRIMER_RIGHT_14_SELF_ANY=7.00 PRIMER_LEFT_14_SELF_END=3.00 PRIMER_RIGHT_14_SELF_END=2.00 PRIMER_LEFT_14_MISPRIMING_SCORE=12.00, MER6 Nonautonomous DNA transposon PRIMER_RIGHT_14_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_14_MISPRIMING_SCORE=23.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_14_END_STABILITY=7.8000 PRIMER_RIGHT_14_END_STABILITY=6.6000 PRIMER_PAIR_14_COMPL_ANY=4.00 PRIMER_PAIR_14_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_14=495 PRIMER_PAIR_PENALTY_15=1.7586 PRIMER_LEFT_15_PENALTY=0.483814 PRIMER_RIGHT_15_PENALTY=1.274768 PRIMER_LEFT_15_SEQUENCE=AGGACACAGACTATGACCACGTC PRIMER_RIGHT_15_SEQUENCE=TTTTCACAGGCTGAAGGAGTTT PRIMER_LEFT_15=394,23 PRIMER_RIGHT_15=909,22 PRIMER_LEFT_15_TM=60.484 PRIMER_RIGHT_15_TM=60.275 PRIMER_LEFT_15_GC_PERCENT=52.174 PRIMER_RIGHT_15_GC_PERCENT=40.909 PRIMER_LEFT_15_SELF_ANY=7.00 PRIMER_RIGHT_15_SELF_ANY=5.00 PRIMER_LEFT_15_SELF_END=3.00 PRIMER_RIGHT_15_SELF_END=0.00 PRIMER_LEFT_15_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_15_MISPRIMING_SCORE=12.00, MER25 Older LINE1 5' end region - a consensus PRIMER_PAIR_15_MISPRIMING_SCORE=21.00, MER25 Older LINE1 5' end region - a consensus PRIMER_LEFT_15_END_STABILITY=7.8000 PRIMER_RIGHT_15_END_STABILITY=6.7000 PRIMER_PAIR_15_COMPL_ANY=6.00 PRIMER_PAIR_15_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_15=516 PRIMER_PAIR_PENALTY_16=1.7586 PRIMER_LEFT_16_PENALTY=0.483814 PRIMER_RIGHT_16_PENALTY=1.274768 PRIMER_LEFT_16_SEQUENCE=AGGACACAGACTATGACCACGTC PRIMER_RIGHT_16_SEQUENCE=TTTCACAGGCTGAAGGAGTTTT PRIMER_LEFT_16=394,23 PRIMER_RIGHT_16=908,22 PRIMER_LEFT_16_TM=60.484 PRIMER_RIGHT_16_TM=60.275 PRIMER_LEFT_16_GC_PERCENT=52.174 PRIMER_RIGHT_16_GC_PERCENT=40.909 PRIMER_LEFT_16_SELF_ANY=7.00 PRIMER_RIGHT_16_SELF_ANY=5.00 PRIMER_LEFT_16_SELF_END=3.00 PRIMER_RIGHT_16_SELF_END=0.00 PRIMER_LEFT_16_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_16_MISPRIMING_SCORE=12.00, reverse MLT1R MLT1-Mammalian LTR retrotransposon internal sequence - a consensus PRIMER_PAIR_16_MISPRIMING_SCORE=21.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_16_END_STABILITY=7.8000 PRIMER_RIGHT_16_END_STABILITY=7.0000 PRIMER_PAIR_16_COMPL_ANY=6.00 PRIMER_PAIR_16_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_16=515 PRIMER_PAIR_PENALTY_17=1.7649 PRIMER_LEFT_17_PENALTY=0.483814 PRIMER_RIGHT_17_PENALTY=1.281044 PRIMER_LEFT_17_SEQUENCE=AGGACACAGACTATGACCACGTC PRIMER_RIGHT_17_SEQUENCE=ACATGGACTTGGGAACTGGTAG PRIMER_LEFT_17=394,23 PRIMER_RIGHT_17=824,22 PRIMER_LEFT_17_TM=60.484 PRIMER_RIGHT_17_TM=60.281 PRIMER_LEFT_17_GC_PERCENT=52.174 PRIMER_RIGHT_17_GC_PERCENT=50.000 PRIMER_LEFT_17_SELF_ANY=7.00 PRIMER_RIGHT_17_SELF_ANY=4.00 PRIMER_LEFT_17_SELF_END=3.00 PRIMER_RIGHT_17_SELF_END=1.00 PRIMER_LEFT_17_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_17_MISPRIMING_SCORE=12.00, reverse L1PB1 3'-end of L1 repeat (subfamily L1PB1) - a consensus sequence PRIMER_PAIR_17_MISPRIMING_SCORE=21.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_17_END_STABILITY=7.8000 PRIMER_RIGHT_17_END_STABILITY=6.9000 PRIMER_PAIR_17_COMPL_ANY=5.00 PRIMER_PAIR_17_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_17=431 PRIMER_PAIR_PENALTY_18=1.7708 PRIMER_LEFT_18_PENALTY=1.495790 PRIMER_RIGHT_18_PENALTY=0.275037 PRIMER_LEFT_18_SEQUENCE=GGACACAGACTATGACCACGTC PRIMER_RIGHT_18_SEQUENCE=TTTCACAGGCTGAAGGAGTTTTA PRIMER_LEFT_18=395,22 PRIMER_RIGHT_18=908,23 PRIMER_LEFT_18_TM=59.504 PRIMER_RIGHT_18_TM=60.275 PRIMER_LEFT_18_GC_PERCENT=54.545 PRIMER_RIGHT_18_GC_PERCENT=39.130 PRIMER_LEFT_18_SELF_ANY=7.00 PRIMER_RIGHT_18_SELF_ANY=5.00 PRIMER_LEFT_18_SELF_END=3.00 PRIMER_RIGHT_18_SELF_END=2.00 PRIMER_LEFT_18_MISPRIMING_SCORE=12.00, MER6 Nonautonomous DNA transposon PRIMER_RIGHT_18_MISPRIMING_SCORE=11.00, L1MC2 3'-end of L1 repeat (subfamily L1MC2) - a consensus sequence PRIMER_PAIR_18_MISPRIMING_SCORE=20.00, L1MC2 3'-end of L1 repeat (subfamily L1MC2) - a consensus sequence PRIMER_LEFT_18_END_STABILITY=7.8000 PRIMER_RIGHT_18_END_STABILITY=6.6000 PRIMER_PAIR_18_COMPL_ANY=6.00 PRIMER_PAIR_18_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_18=514 PRIMER_PAIR_PENALTY_19=1.9367 PRIMER_LEFT_19_PENALTY=0.483814 PRIMER_RIGHT_19_PENALTY=1.452902 PRIMER_LEFT_19_SEQUENCE=AGGACACAGACTATGACCACGTC PRIMER_RIGHT_19_SEQUENCE=TTTTTCACAGGCTGAAGGAGTTT PRIMER_LEFT_19=394,23 PRIMER_RIGHT_19=910,23 PRIMER_LEFT_19_TM=60.484 PRIMER_RIGHT_19_TM=61.453 PRIMER_LEFT_19_GC_PERCENT=52.174 PRIMER_RIGHT_19_GC_PERCENT=39.130 PRIMER_LEFT_19_SELF_ANY=7.00 PRIMER_RIGHT_19_SELF_ANY=5.00 PRIMER_LEFT_19_SELF_END=3.00 PRIMER_RIGHT_19_SELF_END=0.00 PRIMER_LEFT_19_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_19_MISPRIMING_SCORE=12.00, MER25 Older LINE1 5' end region - a consensus PRIMER_PAIR_19_MISPRIMING_SCORE=21.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_19_END_STABILITY=7.8000 PRIMER_RIGHT_19_END_STABILITY=6.7000 PRIMER_PAIR_19_COMPL_ANY=6.00 PRIMER_PAIR_19_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_19=517 =