PRIMER_SEQUENCE_ID=NM_015458 SEQUENCE=AGGAGTCCCTAGCGGCCAGGGCGTGGAAGCGGATTCTGAGGCGGCTTTCTCCTACTGCCCTCCGCTTGCCAACGCGGGACCCGGAGCCCAACGGCAGCGGCGGTCCTTGGGCCTGTGGAGAGGGGTTCTCTGTGGCCGAGTCCTAGGCCTGGTGAACCGCGCGGTGCGGGAGAGGCGCTTGGGCCTCGTCCAGCCCCAGCCCCTGTCTCCCCGCGGCCGGTGCCGGCGGCTGTAGGCCTCGCCGCGCCCACCCAGCCTGGGGCGGGCCCAGCCTCACCGCCCGGCCCGCCCCGCCCCACGGGCCAGCCCCGCGCCGGGTGTTTCCGCTACTTCCCTGCGGCGGGGTAACCGCCTCGCACCTACCGGGCTCGGTTCCCTGGCTCCGGCCGCGGGGGAGCATGGAGTTTGCGGAGCTGATTAAGACCCCGCGGGTGGACAATGTGGTGCTGCACCGGCCTTTCTACCCGGCTGTCGAGGGCACCCTGTGCCTGACGGGCCACCACTTGATCCTGTCCTCCCGGCAGGACAATACGGAGGAGCTGTGGCTCCTCCATTCAAACATCGACGCCATCGACAAGCGATTTGTAGGATCACTGGGTACCATCATCATAAAATGTAAAGATTTTCGAATTATTCAGTTGGATATTCCTGGAATGGAGGAATGCTTGAATATAGCCAGTTCCATTGAGGCATTGTCTACTCTGGACTCCATCACTCTGATGTACCCTTTCTTTTACCGTCCTATGTTTGAAGTGATAGAAGATGGCTGGCATTCCTTCCTTCCTGAGCAAGAATTTGAACTCTATTCTTCAGCTACCAGTGAATGGAGGCTAAGCTATGTCAATAAGGAATTTGCTGTCTGTCCCTCTTACCCACCAATTGTCACAGTGCCCAAATCCATCGATGATGAAGCTCTTCGGAAGGTAGCTACATTTCGACATGGAGGGCGCTTCCCAGTACTAAGCTATTACCACAAAAAAAATGGGATGGTAATTATGCGAAGTGGTCAGCCACTCACTGGTACAAACGGGAGGAGGTGCAAGGAGGACGAGAAGCTGATAAATGCTACCCTCAGGGCTGGAAAGCGTGGCTACATCATTGACACCCGATCCCTGAACGTGGCTCAGCAAACTAGAGCCAAAGGAGGTGGCTTTGAACAAGAAGCTCATTATCCTCAGTGGAGGCGAATTCATAAGTCCATTGAGAGGTATCACATTCTTCAGGAGAGCTTAATCAAACTTGTGGAAGCTTGTAATGACCAAACACATAACATGGACCGATGGCTCAGTAAATTGGAGGCCTCTAACTGGCTGACTCACATCAAAGAGATTCTGACAACTGCCTGCCTAGCGGCTCAGTGCATCGACAGGGAAGGAGCATCAATATTGATTCACGGAACAGAAGGAACTGATTCCACACTCCAGGTGACCTCCTTGGCCCAGATCATCTTAGAGCCAAGAAGCAGGACCATTCGTGGTTTTGAGGCCCTGATTGAAAGAGAGTGGCTGCAGGCTGGTCACCCATTCCAGCAGCGCTGTGCACAGTCAGCCTACTGTAACACCAAGCAGAAGTGGGAGGCTCCTGTATTTCTTCTCTTCTTGGACTGCGTGTGGCAGATCCTTCGTCAGTTTCCCTGTTCTTTTGAGTTTAATGAGAATTTCCTCATCATGCTCTTTGAGCATGCTTATGCCTCACAGTTTGGAACATTTCTGGGCAACAATGAAAGTGAAAGATGTAAGTTGAAGCTACAGCAGAAGACGATGTCTTTGTGGTCCTGGGTTAATCAGCCCAGTGAGCTGAGTAAATTCACCAATCCCCTCTTTGAAGCCAACAACCTTGTCATCTGGCCTTCAGTTGCTCCGCAGAGTCTTCCACTGTGGGAAGGTATTTTCCTACGTTGGAATAGATCCTCTAAGTATTTGGATGAAGCATATGAAGAAATGGTTAACATCATTGAATATAATAAAGAATTACAAGCAAAAGTCAATATCCTTCGAAGGCAGTTGGCAGAACTGGAAACAGAGGACGGGATGCAGGAGAGTCCCTGAAAGGTCTCCTCGCACCCTTCGCAAGGACCTTCTTGGGCCTGTGTCCGCCGTTCTCTCCTTGTGCCCTTCAGTTCACTTTTACACGGTAGCCTTGAAGTGAAGGCTTTAGATGTGGGACCCCCCTAATGTAATGGATTTCTCAATACTGTATGAATAATGAAACTTACTATCATAAACCATGTTTCATGTGGCCTGTTAGGGCCTGTCACTTTGGGAGCCGGAAGGAGGTGCTAGTCATTTTATTTTTACGTGAAATAGATGACCTATTTAATGCCATTTGTGTTTCATGCCATTTTATCCAAAGCTTTTTCTCTGTGTCCACTCTCCAAACAGCATTCTAGAGCAGTCAAGGAGACAGCTAATCTCTCTAGGGACTATTTGGTGGTTTAAAAAAAGGGTCAGACTTTTAAACACTCTGACCATAGAAATGTTTTTCAAAATGGCAACAATGGATAAACCAAGGATTTTGTGTTTAACAATCCATTTCCAGTGTCTTCGCCACATAAAATAGCCATTTTCTTTAAAATAGTTTTGGACTAACGAAGCTGAAATCTATTCTCATTCTTGTTTGTCAAGAAAGGAAAATCTGTTATTCAAGGTAAATTATTTCTACAAGGGCAACAGGTATGGTCCTCCGATATTTACATTAAGAAGAGTTAAATTTATTTTAACGTAGACACTAAAAGTATGTGCAATATACAATTAAAGTAGGAATTTGTTACTGATTGAGAATTGTTACTGGTGAATTGGTTTTCAGGTTTTGAGCATACATATACAATGTGTTTCAAATGCTGCTTGTAAAATTAAACCATCATCTAGAATAGAGTTAATTTATTATAATCAAGCTACAAATAGGTTTTCTTAAACCAGAGATGCACTGCCCTTGTCTAAAGTTCTTATTGCACTGGTTTATATGTGTATGTGTGTTTTATTGTGTGTTTTTTTAATTTGTAAGTATTCTAAGAGTTTCCTAATACTAAGGTTAAAATTTTCATGTTGACCTGAGCCTTTTGCAAATTTGCTTTGGCTCTATTGATTTGTCCATTATGTGTTAGGCAAATATAACTTAAGTGGAGGGGGAAGTTTATGAATATAATATAGCTCTGTGTTTTAAACCTCAGAAACAGATTTGAGTGTTTCAGTATTATAGAAACAGTGATGACTATTCATGCTCTGCTAGTCTATGCCTGCAACTCCAAATGTTTGTGGTTCAGTATTTCCCACCTACATTTCTGTTTGGTGACATTGCTCATTTTAACAAATATGACCGAGTCTAGTTTTTCTTTAAAAGGATAGTTTATGAGTAATCTTTAAAACCATTTCCATACCATCTGTATATAACCATTTCGGTAGAGAACACACTACACTGAACCCTGCTTTAGAGCTGTGTGTTGAGCTAAAAATATAATTTTTTAAAAATTGACTAGCAAAATCTATGGCCACACTGAGAAGCCTTTGAAAATGGCAAATACTTTTCATCACCAATTGCCCAATTCATCTTTCTTCTGCTTCCTCAGCCTTGTAGCAAAGGCTACACAGCAGCCCACAGTCCACAGTCTTTTTGGGAAAATTGGCCTGCCACCTTCTTTAAGCTCAGTTTATTTTTGACTTACTTTCTTTGCTGTAGTTATGAACCTTGGGGCATTAAAATCCCATGGCAAGGAGCATAAGAGATGTTCTCGTAGCTCTGCGTTGTGTGAAATGTCCATCTTAGTTTTGTTAAAAAAAAAAAAAAAAAAAGGAAACAGCCTCACTTTTTTGTGCTCCCTCAGAATTGCTTGCTATGTCTGTTAATACAGCTGAGCTTTTTGTTTTCTTCTCTTTTTGTCTCAAGATTGTATATGAAGGAGGCTTTTCTTCTCAGCTAACAGGCATATAAGGAAAACCATCTAGAGAGTTTTCTTTAGAAGTGACTCCCATTAGCCTGGTGTGGTGGTGTGTGCCTATAGTCCCAGCCACTAGGAAAGCTGAGGCAGAAGGATCCCTTGAGCCTAGGAGGTTGAGGCTGCAGTGAGCTATGATCGCATCAGTCCACTCCAGCCTGAGCAACAGAGCGAGACCCTGTGTCTAAGTAAAGAAAAAGCCAGAAGTGACTCCCACTGCTTCTGTTGATCGGCCATAGGGCTTCCATGGGTGGAAACTTGTGAGGGAGTTTGTATTAGGTCTGGTCATGGAGGGATGATGTACCATCAAGGTAGACCCATCTTCCTGATGCACATTTGCTGTGCGAGCCAGAGTACAGTCATAACACGGTATTCGCATTTCGTTTTCTCTGTCTCACTGAGACAACAATCTATACTGTTTTGGCAAGTTTGCATTTTAGTATTAATTTATAATTAGGGATTGTTCAAACTTCAGATCTGTTTACAGGTTGTAAAAATAAACTTCGGTATCAGTGCATCTACAGAAGTGTTATTTGGTAATCCAAATATTAGAGTTTTCCCAAATCCAAAAACGGTCAGAAATAAGTCCATTATCAATATAATTTGAAGAAGATTTTTAGTAGTACTGTGAAGTTCGTGCTTACCTGGATGAGAAGAATAAATGACACGGATACACTCCTGAGAAGACACTCGTTAAACATTGCATCGGAGAGCTGCCTTTGATAAATGTGCTGTTAAACACTTGAATGAAGAGAATGGTGGCAGAATGAGTGAGCAAGCAGATTGCCCCAGAGGGGCCGGTAATAATCACGTGAGGGATAATCAGATTCCTGCGTATTCAGCATCTTCTCTATTCATGTGGAGTGAAAGCTGGTTTTTATACAGGAGATACGTAAAGTAGGCCCCACAAATAATATTTTTAAAATACAAAGGATCACCACAATCCTCTATTGAACATATAAGGATCCTCAGATTTAAATAAGTACTTTTTTTTTTTTTAATCAGAAGAACATTGTTGTTTGATTATATGTTTTTAAAAACCTGAAGCTTTTTTGGTGGCAGGACCTTTCAATAAATATTTATTTGGTCAAAATTTTTTATTTTGATTTTATTAAATGGGAAGAAAGCAAGCAGAAATAGTAAAATTCAGTAGGTTTAAAACAATCTATAAATGTATTTTATTTCCAAGAAAACTTAGGGTCTCAAAGCAAGATTTTAAAGTGATTTTTGAGAAGACTTGGGGGGGACAATAATAGACATTCATGTCAGATCCCATATGGGGGATTTTTAAACATTTCTTTGAACTTTGAGGCCTGATTTAGGGGTGGGATTTTATTGCTTTTTGTTTTAAAGGATGAAATTTTGTGGGGTTTTAGTCTTTGATTCAGTCAGTATTTGGTTTATGTTAAATAAAAAATCAGTATCATGGAAAAGATATGACCATAATTTAGTCTCCTCAAGTGAAAAACAGGAGTAATGTTTCGTTGCACTTTGAAAGATCTGCTTCAAGGCATAACTCGTGTAGTTGTCTGGTTTCAGGGATAGCTGTTTGAATTGTCATTCTAAAGTAGGTCATCAGGTTCACTTATTATCCGACCTTAATCTGGGATAAAGGTTTTGGTATTTGCCCACTTCTAGATAGAATGAATGAAAACAACACAAGCGTTTTATGAGCACTCTTTATCAGAAAGGTATTTCCTGGACCAGAAATGGGCAATAGTTACAATAGTTGATCCTCTGTTCTGGAAGCTTTGAAATTTATCAGAGAATGAAGTCATTCAGTACATCTGATAAAGTTTTGTTGTTGTTGTTGTTGTTGTTGTTTTAATTGGGCAACCCTCAGAACTGAAGAGGTTCAGAGAACTTTCCAGGTTTATACTATACCTCAAGACCACATAGATTAGCTACTGCTTATTCTTTCACATGGGCTAGGCCTGTTCTCCTCCTCCAGACCTAGTATTCTAAGTTATTACCACATAGTATTTTTATGTTACCCATCATCTTTAAAAACATTATAGGCTGGGCATGGTGGCTTACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAAACCCATGTCTACTAAAAATACAAAAAATTAGCCAGGTGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGTGTGAACCCGGGAGGCAGAGCTTGCAGTGAGCCGAGATCGCACCACTGCACTCCAGCCTGGGCGAAAGGGCAAGACTCCATCTCAAAAAAAAAAAAAAAAAAAGACTCATTTATCCATTTACATTTATTCTCAGATGATAAAATATATACTGATACTATAACTTTCTTATGGTATCAGTTTTCTTTATTTTCTTGAATAAAATTACTTCTACCTTCATTTGGTCTTTATAATCCACTGTCCACAGCATCTTCCTTTAAACCAATAGTCCCAGAAGAGACCCTCTGAAATTCTAGGACTGGATATTAAAATGCCTGAACCTGTTATCTAAATCCTTTTTAAGAAACTTAATGTTCCAGCTCTTGAACTACACTGTGGAACAGTAATTTGTGCCCAATTTAGTGGAAGATAATGAGGCTCACTGTAAACACTACATTGTCCTGCAAAGTAATTCTGATGAGAGTTTACTGACTTCTAGAGCCATTCTCTTTAACCGTCTGCAGGTCTAAGGATTAACTATATTTGTGATTTGTAATAAAACTGAGTTGTACAACACTGCCTGTGTTTGTCTGGCCAAGACATTTGCTTCACTTTTAAAATGCACGTTATCTTTGGAGAGGTGAATTATTCTACAAAATGCACCCTAAATCTCATTGTTTAAAACCTTACTGATCTAATACCATCTACACAAAAAAATGTTGTAGTTGCAGAACTTAGTTTATAAAAACAAAGAATGTGTATTTCTTCAATAGCCGGGTATTTGGATTGTTCTCTTGATAATATTTGAATGTGACTCTTGGATTTAAGTGCACTATTATTCATGGCTTATACAATAAAATTGCACTGTATGGCAAATATGTCTATAATGTATGCTTTGCTGAAACCTCAAGAGTGCTGTAAGGTACAGGTTTCCATATTGTGAACCTGTGTACGCACACACACATATACATACAGTCTTAGGGAAAAAAAAAAGCAGAACTTTTGTAAGTCTGTGTAACATTTTAATATTGTTTGTAATATTCACTAGGTGATAATTTCCCCTGTACCCTATAACTGTAATCATTCACCTTGGGTTGGCCGGTTTGTCAAGCTTGGTTTACTGAATCAAGAAAGAGTCTTGTCGAATGTGGTACTGTTCTTAGTGTGTAATATTTGCGTATGGTGTTCCTCTGCCTCAGAGGACAGTTGCACAGATGGCTAGTGTTAAATTTCTATAGACGATGGTAATAAAATCTGAATATATTTAAGTGCTAATAAATTAAAAAAAAAAAAAAAAAA PRIMER_OPT_SIZE=23 PRIMER_MIN_SIZE=15 PRIMER_MAX_SIZE=26 PRIMER_MISPRIMING_LIBRARY=Human_rep_in_fasta.txt PRIMER_NUM_RETURN=20 PRIMER_NUM_NS_ACCEPTED=1 PRIMER_PRODUCT_SIZE_RANGE=100-999 PRIMER_EXPLAIN_FLAG=1 PRIMER_LEFT_EXPLAIN=considered 85817, GC content failed 6392, low tm 45777, high tm 16909, high any compl 4, high end compl 45, high repeat similarity 51, long poly-x seq 280, ok 16359 PRIMER_RIGHT_EXPLAIN=considered 85906, GC content failed 6853, low tm 46191, high tm 16200, high any compl 3, high end compl 9, high repeat similarity 14, long poly-x seq 267, ok 16369 PRIMER_PAIR_EXPLAIN=considered 11897, unacceptable product size 11794, high any compl 1, high end compl 11, ok 91 PRIMER_PAIR_PENALTY=0.0298 PRIMER_LEFT_PENALTY=0.015613 PRIMER_RIGHT_PENALTY=0.014220 PRIMER_LEFT_SEQUENCE=ACAGGTATGGTCCTCCGATATTT PRIMER_RIGHT_SEQUENCE=TTCTCAGTGTGGCCATAGATTTT PRIMER_LEFT=2668,23 PRIMER_RIGHT=3498,23 PRIMER_LEFT_TM=59.984 PRIMER_RIGHT_TM=60.014 PRIMER_LEFT_GC_PERCENT=43.478 PRIMER_RIGHT_GC_PERCENT=39.130 PRIMER_LEFT_SELF_ANY=4.00 PRIMER_RIGHT_SELF_ANY=6.00 PRIMER_LEFT_SELF_END=2.00 PRIMER_RIGHT_SELF_END=1.00 PRIMER_LEFT_MISPRIMING_SCORE=12.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_MISPRIMING_SCORE=12.00, reverse HSATI Human satellite I DNA HinfI fragment PRIMER_PAIR_MISPRIMING_SCORE=21.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_END_STABILITY=6.2000 PRIMER_RIGHT_END_STABILITY=7.2000 PRIMER_PAIR_COMPL_ANY=5.00 PRIMER_PAIR_COMPL_END=1.00 PRIMER_PRODUCT_SIZE=831 PRIMER_PAIR_PENALTY_1=0.0489 PRIMER_LEFT_1_PENALTY=0.014220 PRIMER_RIGHT_1_PENALTY=0.034674 PRIMER_LEFT_1_SEQUENCE=CAGGGATAGCTGTTTGAATTGTC PRIMER_RIGHT_1_SEQUENCE=AAAACGCTTGTGTTGTTTTCATT PRIMER_LEFT_1=5467,23 PRIMER_RIGHT_1=5599,23 PRIMER_LEFT_1_TM=60.014 PRIMER_RIGHT_1_TM=59.965 PRIMER_LEFT_1_GC_PERCENT=43.478 PRIMER_RIGHT_1_GC_PERCENT=30.435 PRIMER_LEFT_1_SELF_ANY=4.00 PRIMER_RIGHT_1_SELF_ANY=5.00 PRIMER_LEFT_1_SELF_END=1.00 PRIMER_RIGHT_1_SELF_END=1.00 PRIMER_LEFT_1_MISPRIMING_SCORE=12.00, reverse MER25 Older LINE1 5' end region - a consensus PRIMER_RIGHT_1_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_1_MISPRIMING_SCORE=22.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_1_END_STABILITY=6.7000 PRIMER_RIGHT_1_END_STABILITY=6.9000 PRIMER_PAIR_1_COMPL_ANY=5.00 PRIMER_PAIR_1_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_1=133 PRIMER_PAIR_PENALTY_2=0.0489 PRIMER_LEFT_2_PENALTY=0.014220 PRIMER_RIGHT_2_PENALTY=0.034674 PRIMER_LEFT_2_SEQUENCE=TCAGGGATAGCTGTTTGAATTGT PRIMER_RIGHT_2_SEQUENCE=AAAACGCTTGTGTTGTTTTCATT PRIMER_LEFT_2=5466,23 PRIMER_RIGHT_2=5599,23 PRIMER_LEFT_2_TM=60.014 PRIMER_RIGHT_2_TM=59.965 PRIMER_LEFT_2_GC_PERCENT=39.130 PRIMER_RIGHT_2_GC_PERCENT=30.435 PRIMER_LEFT_2_SELF_ANY=4.00 PRIMER_RIGHT_2_SELF_ANY=5.00 PRIMER_LEFT_2_SELF_END=0.00 PRIMER_RIGHT_2_SELF_END=1.00 PRIMER_LEFT_2_MISPRIMING_SCORE=12.00, MER4C a consensus PRIMER_RIGHT_2_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_2_MISPRIMING_SCORE=22.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_2_END_STABILITY=6.6000 PRIMER_RIGHT_2_END_STABILITY=6.9000 PRIMER_PAIR_2_COMPL_ANY=5.00 PRIMER_PAIR_2_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_2=134 PRIMER_PAIR_PENALTY_3=0.0489 PRIMER_LEFT_3_PENALTY=0.014220 PRIMER_RIGHT_3_PENALTY=0.034674 PRIMER_LEFT_3_SEQUENCE=AGGGATAGCTGTTTGAATTGTCA PRIMER_RIGHT_3_SEQUENCE=AAAACGCTTGTGTTGTTTTCATT PRIMER_LEFT_3=5468,23 PRIMER_RIGHT_3=5599,23 PRIMER_LEFT_3_TM=60.014 PRIMER_RIGHT_3_TM=59.965 PRIMER_LEFT_3_GC_PERCENT=39.130 PRIMER_RIGHT_3_GC_PERCENT=30.435 PRIMER_LEFT_3_SELF_ANY=4.00 PRIMER_RIGHT_3_SELF_ANY=5.00 PRIMER_LEFT_3_SELF_END=3.00 PRIMER_RIGHT_3_SELF_END=1.00 PRIMER_LEFT_3_MISPRIMING_SCORE=12.00, MER4C a consensus PRIMER_RIGHT_3_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_3_MISPRIMING_SCORE=21.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_3_END_STABILITY=6.7000 PRIMER_RIGHT_3_END_STABILITY=6.9000 PRIMER_PAIR_3_COMPL_ANY=5.00 PRIMER_PAIR_3_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_3=132 PRIMER_PAIR_PENALTY_4=0.0573 PRIMER_LEFT_4_PENALTY=0.014220 PRIMER_RIGHT_4_PENALTY=0.043085 PRIMER_LEFT_4_SEQUENCE=AAAATCTATGGCCACACTGAGAA PRIMER_RIGHT_4_SEQUENCE=TACTTAGACACAGGGTCTCGCTC PRIMER_LEFT_4=3476,23 PRIMER_RIGHT_4=4121,23 PRIMER_LEFT_4_TM=60.014 PRIMER_RIGHT_4_TM=59.957 PRIMER_LEFT_4_GC_PERCENT=39.130 PRIMER_RIGHT_4_GC_PERCENT=52.174 PRIMER_LEFT_4_SELF_ANY=6.00 PRIMER_RIGHT_4_SELF_ANY=7.00 PRIMER_LEFT_4_SELF_END=0.00 PRIMER_RIGHT_4_SELF_END=1.00 PRIMER_LEFT_4_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_4_MISPRIMING_SCORE=12.00, ALU Human ALU interspersed repetitive sequence - a consensus PRIMER_PAIR_4_MISPRIMING_SCORE=21.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_4_END_STABILITY=6.7000 PRIMER_RIGHT_4_END_STABILITY=9.9000 PRIMER_PAIR_4_COMPL_ANY=4.00 PRIMER_PAIR_4_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_4=646 PRIMER_PAIR_PENALTY_5=0.0673 PRIMER_LEFT_5_PENALTY=0.003045 PRIMER_RIGHT_5_PENALTY=0.064245 PRIMER_LEFT_5_SEQUENCE=TGCTTGAATATAGCCAGTTCCAT PRIMER_RIGHT_5_SEQUENCE=CAGGCAGTTGTCAGAATCTCTTT PRIMER_LEFT_5=662,23 PRIMER_RIGHT_5=1344,23 PRIMER_LEFT_5_TM=60.003 PRIMER_RIGHT_5_TM=59.936 PRIMER_LEFT_5_GC_PERCENT=39.130 PRIMER_RIGHT_5_GC_PERCENT=43.478 PRIMER_LEFT_5_SELF_ANY=4.00 PRIMER_RIGHT_5_SELF_ANY=5.00 PRIMER_LEFT_5_SELF_END=2.00 PRIMER_RIGHT_5_SELF_END=0.00 PRIMER_LEFT_5_MISPRIMING_SCORE=11.00, reverse L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_RIGHT_5_MISPRIMING_SCORE=12.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_PAIR_5_MISPRIMING_SCORE=20.00, L1MA10 3'-end of L1 repeat (subfamily L1MA10) - a consensus sequence PRIMER_LEFT_5_END_STABILITY=8.1000 PRIMER_RIGHT_5_END_STABILITY=7.0000 PRIMER_PAIR_5_COMPL_ANY=4.00 PRIMER_PAIR_5_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_5=683 PRIMER_PAIR_PENALTY_6=0.0673 PRIMER_LEFT_6_PENALTY=0.003045 PRIMER_RIGHT_6_PENALTY=0.064245 PRIMER_LEFT_6_SEQUENCE=TGCTTGAATATAGCCAGTTCCAT PRIMER_RIGHT_6_SEQUENCE=AGGCAGTTGTCAGAATCTCTTTG PRIMER_LEFT_6=662,23 PRIMER_RIGHT_6=1343,23 PRIMER_LEFT_6_TM=60.003 PRIMER_RIGHT_6_TM=59.936 PRIMER_LEFT_6_GC_PERCENT=39.130 PRIMER_RIGHT_6_GC_PERCENT=43.478 PRIMER_LEFT_6_SELF_ANY=4.00 PRIMER_RIGHT_6_SELF_ANY=5.00 PRIMER_LEFT_6_SELF_END=2.00 PRIMER_RIGHT_6_SELF_END=0.00 PRIMER_LEFT_6_MISPRIMING_SCORE=11.00, reverse L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_RIGHT_6_MISPRIMING_SCORE=11.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_PAIR_6_MISPRIMING_SCORE=20.00, reverse L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_LEFT_6_END_STABILITY=8.1000 PRIMER_RIGHT_6_END_STABILITY=7.3000 PRIMER_PAIR_6_COMPL_ANY=3.00 PRIMER_PAIR_6_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_6=682 PRIMER_PAIR_PENALTY_7=0.0673 PRIMER_LEFT_7_PENALTY=0.003045 PRIMER_RIGHT_7_PENALTY=0.064245 PRIMER_LEFT_7_SEQUENCE=ATGCTTGAATATAGCCAGTTCCA PRIMER_RIGHT_7_SEQUENCE=CAGGCAGTTGTCAGAATCTCTTT PRIMER_LEFT_7=661,23 PRIMER_RIGHT_7=1344,23 PRIMER_LEFT_7_TM=60.003 PRIMER_RIGHT_7_TM=59.936 PRIMER_LEFT_7_GC_PERCENT=39.130 PRIMER_RIGHT_7_GC_PERCENT=43.478 PRIMER_LEFT_7_SELF_ANY=4.00 PRIMER_RIGHT_7_SELF_ANY=5.00 PRIMER_LEFT_7_SELF_END=2.00 PRIMER_RIGHT_7_SELF_END=0.00 PRIMER_LEFT_7_MISPRIMING_SCORE=11.00, reverse THE1BR THE-1B Mammalian LTR retrotransposon internal sequence - a consensus PRIMER_RIGHT_7_MISPRIMING_SCORE=12.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_PAIR_7_MISPRIMING_SCORE=21.00, L1MA10 3'-end of L1 repeat (subfamily L1MA10) - a consensus sequence PRIMER_LEFT_7_END_STABILITY=8.5000 PRIMER_RIGHT_7_END_STABILITY=7.0000 PRIMER_PAIR_7_COMPL_ANY=4.00 PRIMER_PAIR_7_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_7=684 PRIMER_PAIR_PENALTY_8=0.0673 PRIMER_LEFT_8_PENALTY=0.003045 PRIMER_RIGHT_8_PENALTY=0.064245 PRIMER_LEFT_8_SEQUENCE=ATGCTTGAATATAGCCAGTTCCA PRIMER_RIGHT_8_SEQUENCE=AGGCAGTTGTCAGAATCTCTTTG PRIMER_LEFT_8=661,23 PRIMER_RIGHT_8=1343,23 PRIMER_LEFT_8_TM=60.003 PRIMER_RIGHT_8_TM=59.936 PRIMER_LEFT_8_GC_PERCENT=39.130 PRIMER_RIGHT_8_GC_PERCENT=43.478 PRIMER_LEFT_8_SELF_ANY=4.00 PRIMER_RIGHT_8_SELF_ANY=5.00 PRIMER_LEFT_8_SELF_END=2.00 PRIMER_RIGHT_8_SELF_END=0.00 PRIMER_LEFT_8_MISPRIMING_SCORE=11.00, reverse THE1BR THE-1B Mammalian LTR retrotransposon internal sequence - a consensus PRIMER_RIGHT_8_MISPRIMING_SCORE=11.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_PAIR_8_MISPRIMING_SCORE=20.00, L1MA10 3'-end of L1 repeat (subfamily L1MA10) - a consensus sequence PRIMER_LEFT_8_END_STABILITY=8.5000 PRIMER_RIGHT_8_END_STABILITY=7.3000 PRIMER_PAIR_8_COMPL_ANY=3.00 PRIMER_PAIR_8_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_8=683 PRIMER_PAIR_PENALTY_9=0.0739 PRIMER_LEFT_9_PENALTY=0.028939 PRIMER_RIGHT_9_PENALTY=0.044969 PRIMER_LEFT_9_SEQUENCE=GGTTCAGAGAACTTTCCAGGTTT PRIMER_RIGHT_9_SEQUENCE=TAGACCTGCAGACGGTTAAAGAG PRIMER_LEFT_9=5783,23 PRIMER_RIGHT_9=6650,23 PRIMER_LEFT_9_TM=60.029 PRIMER_RIGHT_9_TM=59.955 PRIMER_LEFT_9_GC_PERCENT=43.478 PRIMER_RIGHT_9_GC_PERCENT=47.826 PRIMER_LEFT_9_SELF_ANY=5.00 PRIMER_RIGHT_9_SELF_ANY=6.00 PRIMER_LEFT_9_SELF_END=1.00 PRIMER_RIGHT_9_SELF_END=1.00 PRIMER_LEFT_9_MISPRIMING_SCORE=12.00, reverse MER21B a consensus PRIMER_RIGHT_9_MISPRIMING_SCORE=12.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_9_MISPRIMING_SCORE=22.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_9_END_STABILITY=8.2000 PRIMER_RIGHT_9_END_STABILITY=6.7000 PRIMER_PAIR_9_COMPL_ANY=5.00 PRIMER_PAIR_9_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_9=868 PRIMER_PAIR_PENALTY_10=0.0767 PRIMER_LEFT_10_PENALTY=0.003045 PRIMER_RIGHT_10_PENALTY=0.073619 PRIMER_LEFT_10_SEQUENCE=TGCTTGAATATAGCCAGTTCCAT PRIMER_RIGHT_10_SEQUENCE=GTTTGGTCATTACAAGCTTCCAC PRIMER_LEFT_10=662,23 PRIMER_RIGHT_10=1263,23 PRIMER_LEFT_10_TM=60.003 PRIMER_RIGHT_10_TM=59.926 PRIMER_LEFT_10_GC_PERCENT=39.130 PRIMER_RIGHT_10_GC_PERCENT=43.478 PRIMER_LEFT_10_SELF_ANY=4.00 PRIMER_RIGHT_10_SELF_ANY=6.00 PRIMER_LEFT_10_SELF_END=2.00 PRIMER_RIGHT_10_SELF_END=2.00 PRIMER_LEFT_10_MISPRIMING_SCORE=11.00, reverse L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_RIGHT_10_MISPRIMING_SCORE=10.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_10_MISPRIMING_SCORE=21.00, reverse MLT1R MLT1-Mammalian LTR retrotransposon internal sequence - a consensus PRIMER_LEFT_10_END_STABILITY=8.1000 PRIMER_RIGHT_10_END_STABILITY=7.9000 PRIMER_PAIR_10_COMPL_ANY=6.00 PRIMER_PAIR_10_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_10=602 PRIMER_PAIR_PENALTY_11=0.0767 PRIMER_LEFT_11_PENALTY=0.003045 PRIMER_RIGHT_11_PENALTY=0.073619 PRIMER_LEFT_11_SEQUENCE=TGCTTGAATATAGCCAGTTCCAT PRIMER_RIGHT_11_SEQUENCE=GTGTTTGGTCATTACAAGCTTCC PRIMER_LEFT_11=662,23 PRIMER_RIGHT_11=1265,23 PRIMER_LEFT_11_TM=60.003 PRIMER_RIGHT_11_TM=59.926 PRIMER_LEFT_11_GC_PERCENT=39.130 PRIMER_RIGHT_11_GC_PERCENT=43.478 PRIMER_LEFT_11_SELF_ANY=4.00 PRIMER_RIGHT_11_SELF_ANY=6.00 PRIMER_LEFT_11_SELF_END=2.00 PRIMER_RIGHT_11_SELF_END=2.00 PRIMER_LEFT_11_MISPRIMING_SCORE=11.00, reverse L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_RIGHT_11_MISPRIMING_SCORE=11.00, reverse MSTa consensus sequence PRIMER_PAIR_11_MISPRIMING_SCORE=20.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_11_END_STABILITY=8.1000 PRIMER_RIGHT_11_END_STABILITY=8.2000 PRIMER_PAIR_11_COMPL_ANY=6.00 PRIMER_PAIR_11_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_11=604 PRIMER_PAIR_PENALTY_12=0.0767 PRIMER_LEFT_12_PENALTY=0.003045 PRIMER_RIGHT_12_PENALTY=0.073619 PRIMER_LEFT_12_SEQUENCE=ATGCTTGAATATAGCCAGTTCCA PRIMER_RIGHT_12_SEQUENCE=GTTTGGTCATTACAAGCTTCCAC PRIMER_LEFT_12=661,23 PRIMER_RIGHT_12=1263,23 PRIMER_LEFT_12_TM=60.003 PRIMER_RIGHT_12_TM=59.926 PRIMER_LEFT_12_GC_PERCENT=39.130 PRIMER_RIGHT_12_GC_PERCENT=43.478 PRIMER_LEFT_12_SELF_ANY=4.00 PRIMER_RIGHT_12_SELF_ANY=6.00 PRIMER_LEFT_12_SELF_END=2.00 PRIMER_RIGHT_12_SELF_END=2.00 PRIMER_LEFT_12_MISPRIMING_SCORE=11.00, reverse THE1BR THE-1B Mammalian LTR retrotransposon internal sequence - a consensus PRIMER_RIGHT_12_MISPRIMING_SCORE=10.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_12_MISPRIMING_SCORE=20.00, reverse THE1BR THE-1B Mammalian LTR retrotransposon internal sequence - a consensus PRIMER_LEFT_12_END_STABILITY=8.5000 PRIMER_RIGHT_12_END_STABILITY=7.9000 PRIMER_PAIR_12_COMPL_ANY=6.00 PRIMER_PAIR_12_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_12=603 PRIMER_PAIR_PENALTY_13=0.0767 PRIMER_LEFT_13_PENALTY=0.003045 PRIMER_RIGHT_13_PENALTY=0.073619 PRIMER_LEFT_13_SEQUENCE=ATGCTTGAATATAGCCAGTTCCA PRIMER_RIGHT_13_SEQUENCE=GTGTTTGGTCATTACAAGCTTCC PRIMER_LEFT_13=661,23 PRIMER_RIGHT_13=1265,23 PRIMER_LEFT_13_TM=60.003 PRIMER_RIGHT_13_TM=59.926 PRIMER_LEFT_13_GC_PERCENT=39.130 PRIMER_RIGHT_13_GC_PERCENT=43.478 PRIMER_LEFT_13_SELF_ANY=4.00 PRIMER_RIGHT_13_SELF_ANY=6.00 PRIMER_LEFT_13_SELF_END=2.00 PRIMER_RIGHT_13_SELF_END=2.00 PRIMER_LEFT_13_MISPRIMING_SCORE=11.00, reverse THE1BR THE-1B Mammalian LTR retrotransposon internal sequence - a consensus PRIMER_RIGHT_13_MISPRIMING_SCORE=11.00, reverse MSTa consensus sequence PRIMER_PAIR_13_MISPRIMING_SCORE=19.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_13_END_STABILITY=8.5000 PRIMER_RIGHT_13_END_STABILITY=8.2000 PRIMER_PAIR_13_COMPL_ANY=6.00 PRIMER_PAIR_13_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_13=605 PRIMER_PAIR_PENALTY_14=0.0810 PRIMER_LEFT_14_PENALTY=0.053000 PRIMER_RIGHT_14_PENALTY=0.027955 PRIMER_LEFT_14_SEQUENCE=GTTGCACTTTGAAAGATCTGCTT PRIMER_RIGHT_14_SEQUENCE=GCAAATACCAAAACCTTTATCCC PRIMER_LEFT_14=5414,23 PRIMER_RIGHT_14=5558,23 PRIMER_LEFT_14_TM=59.947 PRIMER_RIGHT_14_TM=59.972 PRIMER_LEFT_14_GC_PERCENT=39.130 PRIMER_RIGHT_14_GC_PERCENT=39.130 PRIMER_LEFT_14_SELF_ANY=7.00 PRIMER_RIGHT_14_SELF_ANY=4.00 PRIMER_LEFT_14_SELF_END=2.00 PRIMER_RIGHT_14_SELF_END=0.00 PRIMER_LEFT_14_MISPRIMING_SCORE=12.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_14_MISPRIMING_SCORE=10.00, Tigger2 Autonomous DNA transposon PRIMER_PAIR_14_MISPRIMING_SCORE=20.00, Tigger2 Autonomous DNA transposon PRIMER_LEFT_14_END_STABILITY=8.5000 PRIMER_RIGHT_14_END_STABILITY=9.3000 PRIMER_PAIR_14_COMPL_ANY=4.00 PRIMER_PAIR_14_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_14=145 PRIMER_PAIR_PENALTY_15=0.0810 PRIMER_LEFT_15_PENALTY=0.053000 PRIMER_RIGHT_15_PENALTY=0.027955 PRIMER_LEFT_15_SEQUENCE=GTTGCACTTTGAAAGATCTGCTT PRIMER_RIGHT_15_SEQUENCE=GGCAAATACCAAAACCTTTATCC PRIMER_LEFT_15=5414,23 PRIMER_RIGHT_15=5559,23 PRIMER_LEFT_15_TM=59.947 PRIMER_RIGHT_15_TM=59.972 PRIMER_LEFT_15_GC_PERCENT=39.130 PRIMER_RIGHT_15_GC_PERCENT=39.130 PRIMER_LEFT_15_SELF_ANY=7.00 PRIMER_RIGHT_15_SELF_ANY=4.00 PRIMER_LEFT_15_SELF_END=2.00 PRIMER_RIGHT_15_SELF_END=0.00 PRIMER_LEFT_15_MISPRIMING_SCORE=12.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_15_MISPRIMING_SCORE=11.00, Tigger2 Autonomous DNA transposon PRIMER_PAIR_15_MISPRIMING_SCORE=21.00, Tigger2 Autonomous DNA transposon PRIMER_LEFT_15_END_STABILITY=8.5000 PRIMER_RIGHT_15_END_STABILITY=7.1000 PRIMER_PAIR_15_COMPL_ANY=4.00 PRIMER_PAIR_15_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_15=146 PRIMER_PAIR_PENALTY_16=0.0810 PRIMER_LEFT_16_PENALTY=0.053000 PRIMER_RIGHT_16_PENALTY=0.027955 PRIMER_LEFT_16_SEQUENCE=GTTGCACTTTGAAAGATCTGCTT PRIMER_RIGHT_16_SEQUENCE=GGGCAAATACCAAAACCTTTATC PRIMER_LEFT_16=5414,23 PRIMER_RIGHT_16=5560,23 PRIMER_LEFT_16_TM=59.947 PRIMER_RIGHT_16_TM=59.972 PRIMER_LEFT_16_GC_PERCENT=39.130 PRIMER_RIGHT_16_GC_PERCENT=39.130 PRIMER_LEFT_16_SELF_ANY=7.00 PRIMER_RIGHT_16_SELF_ANY=4.00 PRIMER_LEFT_16_SELF_END=2.00 PRIMER_RIGHT_16_SELF_END=0.00 PRIMER_LEFT_16_MISPRIMING_SCORE=12.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_16_MISPRIMING_SCORE=12.00, reverse MER4C a consensus PRIMER_PAIR_16_MISPRIMING_SCORE=21.00, reverse MLT1R MLT1-Mammalian LTR retrotransposon internal sequence - a consensus PRIMER_LEFT_16_END_STABILITY=8.5000 PRIMER_RIGHT_16_END_STABILITY=5.9000 PRIMER_PAIR_16_COMPL_ANY=4.00 PRIMER_PAIR_16_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_16=147 PRIMER_PAIR_PENALTY_17=0.0859 PRIMER_LEFT_17_PENALTY=0.070333 PRIMER_RIGHT_17_PENALTY=0.015613 PRIMER_LEFT_17_SEQUENCE=CCCCCTAATGTAATGGATTTCTC PRIMER_RIGHT_17_SEQUENCE=AATATCGGAGGACCATACCTGTT PRIMER_LEFT_17=2166,23 PRIMER_RIGHT_17=2689,23 PRIMER_LEFT_17_TM=59.930 PRIMER_RIGHT_17_TM=59.984 PRIMER_LEFT_17_GC_PERCENT=43.478 PRIMER_RIGHT_17_GC_PERCENT=43.478 PRIMER_LEFT_17_SELF_ANY=4.00 PRIMER_RIGHT_17_SELF_ANY=4.00 PRIMER_LEFT_17_SELF_END=0.00 PRIMER_RIGHT_17_SELF_END=1.00 PRIMER_LEFT_17_MISPRIMING_SCORE=11.00, L1MC2 3'-end of L1 repeat (subfamily L1MC2) - a consensus sequence PRIMER_RIGHT_17_MISPRIMING_SCORE=11.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_17_MISPRIMING_SCORE=21.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_17_END_STABILITY=6.7000 PRIMER_RIGHT_17_END_STABILITY=6.7000 PRIMER_PAIR_17_COMPL_ANY=4.00 PRIMER_PAIR_17_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_17=524 PRIMER_PAIR_PENALTY_18=0.0859 PRIMER_LEFT_18_PENALTY=0.015613 PRIMER_RIGHT_18_PENALTY=0.070333 PRIMER_LEFT_18_SEQUENCE=ACAGGTATGGTCCTCCGATATTT PRIMER_RIGHT_18_SEQUENCE=ATATTCATAAACTTCCCCCTCCA PRIMER_LEFT_18=2668,23 PRIMER_RIGHT_18=3141,23 PRIMER_LEFT_18_TM=59.984 PRIMER_RIGHT_18_TM=59.930 PRIMER_LEFT_18_GC_PERCENT=43.478 PRIMER_RIGHT_18_GC_PERCENT=39.130 PRIMER_LEFT_18_SELF_ANY=4.00 PRIMER_RIGHT_18_SELF_ANY=4.00 PRIMER_LEFT_18_SELF_END=2.00 PRIMER_RIGHT_18_SELF_END=0.00 PRIMER_LEFT_18_MISPRIMING_SCORE=12.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_18_MISPRIMING_SCORE=11.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_PAIR_18_MISPRIMING_SCORE=22.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_18_END_STABILITY=6.2000 PRIMER_RIGHT_18_END_STABILITY=8.2000 PRIMER_PAIR_18_COMPL_ANY=4.00 PRIMER_PAIR_18_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_18=474 PRIMER_PAIR_PENALTY_19=0.0859 PRIMER_LEFT_19_PENALTY=0.015613 PRIMER_RIGHT_19_PENALTY=0.070333 PRIMER_LEFT_19_SEQUENCE=AACAGGTATGGTCCTCCGATATT PRIMER_RIGHT_19_SEQUENCE=ATATTCATAAACTTCCCCCTCCA PRIMER_LEFT_19=2667,23 PRIMER_RIGHT_19=3141,23 PRIMER_LEFT_19_TM=59.984 PRIMER_RIGHT_19_TM=59.930 PRIMER_LEFT_19_GC_PERCENT=43.478 PRIMER_RIGHT_19_GC_PERCENT=39.130 PRIMER_LEFT_19_SELF_ANY=4.00 PRIMER_RIGHT_19_SELF_ANY=4.00 PRIMER_LEFT_19_SELF_END=2.00 PRIMER_RIGHT_19_SELF_END=0.00 PRIMER_LEFT_19_MISPRIMING_SCORE=11.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_19_MISPRIMING_SCORE=11.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_PAIR_19_MISPRIMING_SCORE=22.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_19_END_STABILITY=5.8000 PRIMER_RIGHT_19_END_STABILITY=8.2000 PRIMER_PAIR_19_COMPL_ANY=4.00 PRIMER_PAIR_19_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_19=475 =