PRIMER_SEQUENCE_ID=NM_030640 SEQUENCE=GGAAGAGAAAGAGTGAAGAAAAGTTGCGAGCGTCTCCTCTCTTCCTAAGCCTCCCGCCCCAACCCACCCCTCAGAGAAGGAGAAGATAATATACTGAAAAGAAGAGGAGGAGGAGAGCGACGGGACGGGACGCGAGCGGGAGCGCAGCCGCCCTCTCGGCTCCGCGGCGGCGCCTCGCAAGTCCGGGAGGCGAGGGGGGCCCGAGGGGAGACGCCGTGACAACTTTCGTTTCCCTCTGAGGGAATTGGGAGGTCGGCGGCCCCAAAAGCTTTCAGTCCAGTGTAAAGCTGTTGGAGCGCGGGAGCAAAGGTAAAGAATGATGTAATGCGCTGGCTGCTCCAAAGCATCTTTTGTTGTGGAATGGTTATTCCAGTCATCTCTTTATGAATCAAATGTGAGGGGCTGCTTTGTGGACGGAGTCCTTTGCAAGAGCACATCAACGGGAAAGAGAAAGAGACATTCACTTGGAGGGCTCTTGCTGAAAATGGGTTTAACTCTCCTTTTGCCAGTCACCACCAGCCTGACCTCATACACTTTTAGTACAATGGAGTGGCTGAGCCTTTGAGCACACCACCATTACATCATCGTGGCAAATTAAAGAAGGAGGTGGGAAAAGAGGACTTATTGTTGTCATGGCCCATGAGATGATTGGAACTCAAATTGTTACTGAGAGGTTGGTGGCTCTGCTGGAAAGTGGAACGGAAAAAGTGCTGCTAATTGATAGCCGGCCATTTGTGGAATACAATACATCCCACATTTTGGAAGCCATTAATATCAACTGCTCCAAGCTTATGAAGCGAAGGTTGCAACAGGACAAAGTGTTAATTACAGAGCTCATCCAGCATTCAGCGAAACATAAGGTTGACATTGATTGCAGTCAGAAGGTTGTAGTTTACGATCAAAGCTCCCAAGATGTTGCCTCTCTCTCTTCAGACTGTTTTCTCACTGTACTTCTGGGTAAACTGGAGAAGAGCTTCAACTCTGTTCACCTGCTTGCAGGTGGGTTTGCTGAGTTCTCTCGTTGTTTCCCTGGCCTCTGTGAAGGAAAATCCACTCTAGTCCCTACCTGCATTTCTCAGCCTTGCTTACCTGTTGCCAACATTGGGCCAACCCGAATTCTTCCCAATCTTTATCTTGGCTGCCAGCGAGATGTCCTCAACAAGGAGCTGATGCAGCAGAATGGGATTGGTTATGTGTTAAATGCCAGCAATACCTGTCCAAAGCCTGACTTTATCCCCGAGTCTCATTTCCTGCGTGTGCCTGTGAATGACAGCTTTTGTGAGAAAATTTTGCCGTGGTTGGACAAATCAGTAGATTTCATTGAGAAAGCAAAAGCCTCCAATGGATGTGTTCTAGTGCACTGTTTAGCTGGGATCTCCCGCTCCGCCACCATCGCTATCGCCTACATCATGAAGAGGATGGACATGTCTTTAGATGAAGCTTACAGATTTGTGAAAGAAAAAAGACCTACTATATCTCCAAACTTCAATTTTCTGGGCCAACTCCTGGACTATGAGAAGAAGATTAAGAACCAGACTGGAGCATCAGGGCCAAAGAGCAAACTCAAGCTGCTGCACCTGGAGAAGCCAAATGAACCTGTCCCTGCTGTCTCAGAGGGTGGACAGAAAAGCGAGACGCCCCTCAGTCCACCCTGTGCCGACTCTGCTACCTCAGAGGCAGCAGGACAAAGGCCCGTGCATCCCGCCAGCGTGCCCAGCGTGCCCAGCGTGCAGCCGTCGCTGTTAGAGGACAGCCCGCTGGTACAGGCGCTCAGTGGGCTGCACCTGTCCGCAGACAGGCTGGAAGACAGCAATAAGCTCAAGCGTTCCTTCTCTCTGGATATCAAATCAGTTTCATATTCAGCCAGCATGGCAGCATCCTTACATGGCTTCTCCTCATCAGAAGATGCTTTGGAATACTACAAACCTTCCACTACTCTGGATGGGACCAACAAGCTATGCCAGTTCTCCCCTGTTCAGGAACTATCGGAGCAGACTCCCGAAACCAGTCCTGATAAGGAGGAAGCCAGCATCCCCAAGAAGCTGCAGACCGCCAGGCCTTCAGACAGCCAGAGCAAGCGATTGCATTCGGTCAGAACCAGCAGCAGTGGCACCGCCCAGAGGTCCCTTTTATCTCCACTGCATCGAAGTGGGAGCGTGGAGGACAATTACCACACCAGCTTCCTTTTCGGCCTTTCCACCAGCCAGCAGCACCTCACGAAGTCTGCTGGCCTGGGCCTTAAGGGCTGGCACTCGGATATCTTGGCCCCCCAGACCTCTACCCCTTCCCTGACCAGCAGCTGGTATTTTGCCACAGAGTCCTCACACTTCTACTCTGCCTCAGCCATCTACGGAGGCAGTGCCAGTTACTCTGCCTACAGCTGCAGCCAGCTGCCCACTTGCGGAGACCAAGTCTATTCTGTGCGCAGGCGGCAGAAGCCAAGTGACAGAGCTGACTCGCGGCGGAGCTGGCATGAAGAGAGCCCCTTTGAAAAGCAGTTTAAACGCAGAAGCTGCCAAATGGAATTTGGAGAGAGCATCATGTCAGAGAACAGGTCACGGGAAGAGCTGGGGAAAGTGGGCAGTCAGTCTAGCTTTTCGGGCAGCATGGAAATCATTGAGGTCTCCTGAGAAGAAAGACACTTGTGACTTCTATAGACAATTTTTTTTTCTTGTTCACAAAAAAATTCCCTGTAAATCTGAAATATATATATGTACATACATATATATTTTTGGAAAATGGAGCTATGGTGTAAAAGCAACAGGTGGATCAACCCAGTTGTTACTCTCTTAACATCTGCATTTGAGAGATCAGCTAATACTTCTCTCAACAAAAATGGAAGGGCAGATGCTAGAATCCCCCCTAGACGGAGGAAAACCATTTTATTCAGTGAATTACACATCCTCTTGTTCTTAAAAAAGCAAGTGTCTTTGGTGTTGGAGGACAAAATCCCCTACCATTTTCACGTTGTGCTACTAAGAGATCTCAAATATTAGTCTTTGTCCGGACCCTTCCATAGTACACCTTAGCGCTGAGACTGAGCCAGCTTGGGGGTCAGGTAGGTAGACCCTGTTAGGGACAGAGCCTAGTGGTAAATCCAAGAGAAATGATCCTATCCAAAGCTGATTCACAAACCCACGCTCACCTGACAGCCGAGGGACACGAGCATCACTCTGCTGGACGGACCATTAGGGGCCTTGCCAAGGTCTACCTTAGAGCAAACCCAGTACCTCAGACAGGAAAGTCGGGGCTTTGACCACTACCATATCTGGTAGCCCATTTTCTAGGCATTGTGAATAGGTAGGTAGCTAGTCACACTTTTCAGACCAATTCAAACTGTCTATGCACAAAATTCCCGTGGGCCTAGATGGAGATAATTTTTTTTTCTTCTCAGCTTTATGAAGAGAAGGGAAACTGTCTAGGATTCAGCTGAACCACCAGGAACCTGGCAACATCACGATTTAAGCTAAGGTTGGGAGGCTAACGAGTCTACCTCCCTCTTTGTAAATCAAAGAATTGTTTAAAATGGGATTGTCAATCCTTTAAATAAAGATGAACTTGGTTTC PRIMER_OPT_SIZE=23 PRIMER_MIN_SIZE=15 PRIMER_MAX_SIZE=26 PRIMER_MISPRIMING_LIBRARY=Human_rep_in_fasta.txt PRIMER_NUM_RETURN=20 PRIMER_NUM_NS_ACCEPTED=1 PRIMER_PRODUCT_SIZE_RANGE=100-999 PRIMER_EXPLAIN_FLAG=1 PRIMER_LEFT_EXPLAIN=considered 40446, GC content failed 1154, low tm 16407, high tm 13953, high any compl 1, high end compl 33, high repeat similarity 34, long poly-x seq 157, ok 8707 PRIMER_RIGHT_EXPLAIN=considered 40461, GC content failed 1254, low tm 16608, high tm 13594, high any compl 1, high end compl 5, high repeat similarity 5, long poly-x seq 159, ok 8835 PRIMER_PAIR_EXPLAIN=considered 391, unacceptable product size 333, high end compl 7, ok 51 PRIMER_PAIR_PENALTY=0.0094 PRIMER_LEFT_PENALTY=0.003045 PRIMER_RIGHT_PENALTY=0.006308 PRIMER_LEFT_SEQUENCE=AGCCATTAATATCAACTGCTCCA PRIMER_RIGHT_SEQUENCE=AACACATAACCAATCCCATTCTG PRIMER_LEFT=763,23 PRIMER_RIGHT=1197,23 PRIMER_LEFT_TM=60.003 PRIMER_RIGHT_TM=59.994 PRIMER_LEFT_GC_PERCENT=39.130 PRIMER_RIGHT_GC_PERCENT=39.130 PRIMER_LEFT_SELF_ANY=8.00 PRIMER_RIGHT_SELF_ANY=3.00 PRIMER_LEFT_SELF_END=2.00 PRIMER_RIGHT_SELF_END=1.00 PRIMER_LEFT_MISPRIMING_SCORE=12.00, L1MB7 3'-end of L1 repeat (subfamily L1MB7) - a consensus sequence PRIMER_RIGHT_MISPRIMING_SCORE=11.00, MLT1a (MLT1a subfamily) - consensus sequence PRIMER_PAIR_MISPRIMING_SCORE=22.00, HSATI Human satellite I DNA HinfI fragment PRIMER_LEFT_END_STABILITY=8.2000 PRIMER_RIGHT_END_STABILITY=7.0000 PRIMER_PAIR_COMPL_ANY=3.00 PRIMER_PAIR_COMPL_END=2.00 PRIMER_PRODUCT_SIZE=435 PRIMER_PAIR_PENALTY_1=0.0151 PRIMER_LEFT_1_PENALTY=0.006308 PRIMER_RIGHT_1_PENALTY=0.008825 PRIMER_LEFT_1_SEQUENCE=CAGAATGGGATTGGTTATGTGTT PRIMER_RIGHT_1_SEQUENCE=AGTGGAGATAAAAGGGACCTCTG PRIMER_LEFT_1=1175,23 PRIMER_RIGHT_1=2139,23 PRIMER_LEFT_1_TM=59.994 PRIMER_RIGHT_1_TM=60.009 PRIMER_LEFT_1_GC_PERCENT=39.130 PRIMER_RIGHT_1_GC_PERCENT=47.826 PRIMER_LEFT_1_SELF_ANY=3.00 PRIMER_RIGHT_1_SELF_ANY=4.00 PRIMER_LEFT_1_SELF_END=0.00 PRIMER_RIGHT_1_SELF_END=2.00 PRIMER_LEFT_1_MISPRIMING_SCORE=11.00, MER4C a consensus PRIMER_RIGHT_1_MISPRIMING_SCORE=12.00, reverse L1MA2 3'-end of L1 repeat (subfamily L1MA2) - a consensus sequence PRIMER_PAIR_1_MISPRIMING_SCORE=22.00, reverse L1MA2 3'-end of L1 repeat (subfamily L1MA2) - a consensus sequence PRIMER_LEFT_1_END_STABILITY=6.4000 PRIMER_RIGHT_1_END_STABILITY=6.7000 PRIMER_PAIR_1_COMPL_ANY=4.00 PRIMER_PAIR_1_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_1=965 PRIMER_PAIR_PENALTY_2=0.0337 PRIMER_LEFT_2_PENALTY=0.013200 PRIMER_RIGHT_2_PENALTY=0.020535 PRIMER_LEFT_2_SEQUENCE=AGTGCCAGTTACTCTGCCTACAG PRIMER_RIGHT_2_SEQUENCE=TGTGAATCAGCTTTGGATAGGAT PRIMER_LEFT_2=2357,23 PRIMER_RIGHT_2=3131,23 PRIMER_LEFT_2_TM=60.013 PRIMER_RIGHT_2_TM=59.979 PRIMER_LEFT_2_GC_PERCENT=52.174 PRIMER_RIGHT_2_GC_PERCENT=39.130 PRIMER_LEFT_2_SELF_ANY=5.00 PRIMER_RIGHT_2_SELF_ANY=5.00 PRIMER_LEFT_2_SELF_END=2.00 PRIMER_RIGHT_2_SELF_END=2.00 PRIMER_LEFT_2_MISPRIMING_SCORE=12.00, reverse BSR Human beta satellite DNA - a consensus PRIMER_RIGHT_2_MISPRIMING_SCORE=11.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_PAIR_2_MISPRIMING_SCORE=20.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_2_END_STABILITY=5.7000 PRIMER_RIGHT_2_END_STABILITY=7.8000 PRIMER_PAIR_2_COMPL_ANY=4.00 PRIMER_PAIR_2_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_2=775 PRIMER_PAIR_PENALTY_3=0.0384 PRIMER_LEFT_3_PENALTY=0.003045 PRIMER_RIGHT_3_PENALTY=0.035384 PRIMER_LEFT_3_SEQUENCE=AGCCATTAATATCAACTGCTCCA PRIMER_RIGHT_3_SEQUENCE=GCAGGTAGGGACTAGAGTGGATT PRIMER_LEFT_3=763,23 PRIMER_RIGHT_3=1069,23 PRIMER_LEFT_3_TM=60.003 PRIMER_RIGHT_3_TM=60.035 PRIMER_LEFT_3_GC_PERCENT=39.130 PRIMER_RIGHT_3_GC_PERCENT=52.174 PRIMER_LEFT_3_SELF_ANY=8.00 PRIMER_RIGHT_3_SELF_ANY=4.00 PRIMER_LEFT_3_SELF_END=2.00 PRIMER_RIGHT_3_SELF_END=1.00 PRIMER_LEFT_3_MISPRIMING_SCORE=12.00, L1MB7 3'-end of L1 repeat (subfamily L1MB7) - a consensus sequence PRIMER_RIGHT_3_MISPRIMING_SCORE=12.00, MLT1R MLT1-Mammalian LTR retrotransposon internal sequence - a consensus PRIMER_PAIR_3_MISPRIMING_SCORE=24.00, HSATI Human satellite I DNA HinfI fragment PRIMER_LEFT_3_END_STABILITY=8.2000 PRIMER_RIGHT_3_END_STABILITY=8.1000 PRIMER_PAIR_3_COMPL_ANY=5.00 PRIMER_PAIR_3_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_3=307 PRIMER_PAIR_PENALTY_4=0.0453 PRIMER_LEFT_4_PENALTY=0.008825 PRIMER_RIGHT_4_PENALTY=0.036444 PRIMER_LEFT_4_SEQUENCE=CAGAGGTCCCTTTTATCTCCACT PRIMER_RIGHT_4_SEQUENCE=TGCTTTTACACCATAGCTCCATT PRIMER_LEFT_4=2117,23 PRIMER_RIGHT_4=2759,23 PRIMER_LEFT_4_TM=60.009 PRIMER_RIGHT_4_TM=60.036 PRIMER_LEFT_4_GC_PERCENT=47.826 PRIMER_RIGHT_4_GC_PERCENT=39.130 PRIMER_LEFT_4_SELF_ANY=4.00 PRIMER_RIGHT_4_SELF_ANY=4.00 PRIMER_LEFT_4_SELF_END=1.00 PRIMER_RIGHT_4_SELF_END=1.00 PRIMER_LEFT_4_MISPRIMING_SCORE=12.00, reverse L1MA2 3'-end of L1 repeat (subfamily L1MA2) - a consensus sequence PRIMER_RIGHT_4_MISPRIMING_SCORE=12.00, MER33 Nonautonomous DNA transposon PRIMER_PAIR_4_MISPRIMING_SCORE=22.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_4_END_STABILITY=7.9000 PRIMER_RIGHT_4_END_STABILITY=8.4000 PRIMER_PAIR_4_COMPL_ANY=3.00 PRIMER_PAIR_4_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_4=643 PRIMER_PAIR_PENALTY_5=0.0453 PRIMER_LEFT_5_PENALTY=0.008825 PRIMER_RIGHT_5_PENALTY=0.036444 PRIMER_LEFT_5_SEQUENCE=CAGAGGTCCCTTTTATCTCCACT PRIMER_RIGHT_5_SEQUENCE=TTGCTTTTACACCATAGCTCCAT PRIMER_LEFT_5=2117,23 PRIMER_RIGHT_5=2760,23 PRIMER_LEFT_5_TM=60.009 PRIMER_RIGHT_5_TM=60.036 PRIMER_LEFT_5_GC_PERCENT=47.826 PRIMER_RIGHT_5_GC_PERCENT=39.130 PRIMER_LEFT_5_SELF_ANY=4.00 PRIMER_RIGHT_5_SELF_ANY=4.00 PRIMER_LEFT_5_SELF_END=1.00 PRIMER_RIGHT_5_SELF_END=2.00 PRIMER_LEFT_5_MISPRIMING_SCORE=12.00, reverse L1MA2 3'-end of L1 repeat (subfamily L1MA2) - a consensus sequence PRIMER_RIGHT_5_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_5_MISPRIMING_SCORE=23.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_5_END_STABILITY=7.9000 PRIMER_RIGHT_5_END_STABILITY=8.1000 PRIMER_PAIR_5_COMPL_ANY=3.00 PRIMER_PAIR_5_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_5=644 PRIMER_PAIR_PENALTY_6=0.0453 PRIMER_LEFT_6_PENALTY=0.008825 PRIMER_RIGHT_6_PENALTY=0.036444 PRIMER_LEFT_6_SEQUENCE=AGAGGTCCCTTTTATCTCCACTG PRIMER_RIGHT_6_SEQUENCE=TGCTTTTACACCATAGCTCCATT PRIMER_LEFT_6=2118,23 PRIMER_RIGHT_6=2759,23 PRIMER_LEFT_6_TM=60.009 PRIMER_RIGHT_6_TM=60.036 PRIMER_LEFT_6_GC_PERCENT=47.826 PRIMER_RIGHT_6_GC_PERCENT=39.130 PRIMER_LEFT_6_SELF_ANY=4.00 PRIMER_RIGHT_6_SELF_ANY=4.00 PRIMER_LEFT_6_SELF_END=3.00 PRIMER_RIGHT_6_SELF_END=1.00 PRIMER_LEFT_6_MISPRIMING_SCORE=11.00, Tigger1 Autonomous DNA transposon PRIMER_RIGHT_6_MISPRIMING_SCORE=12.00, MER33 Nonautonomous DNA transposon PRIMER_PAIR_6_MISPRIMING_SCORE=22.00, Tigger1 Autonomous DNA transposon PRIMER_LEFT_6_END_STABILITY=6.7000 PRIMER_RIGHT_6_END_STABILITY=8.4000 PRIMER_PAIR_6_COMPL_ANY=3.00 PRIMER_PAIR_6_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_6=642 PRIMER_PAIR_PENALTY_7=0.0453 PRIMER_LEFT_7_PENALTY=0.008825 PRIMER_RIGHT_7_PENALTY=0.036444 PRIMER_LEFT_7_SEQUENCE=AGAGGTCCCTTTTATCTCCACTG PRIMER_RIGHT_7_SEQUENCE=TTGCTTTTACACCATAGCTCCAT PRIMER_LEFT_7=2118,23 PRIMER_RIGHT_7=2760,23 PRIMER_LEFT_7_TM=60.009 PRIMER_RIGHT_7_TM=60.036 PRIMER_LEFT_7_GC_PERCENT=47.826 PRIMER_RIGHT_7_GC_PERCENT=39.130 PRIMER_LEFT_7_SELF_ANY=4.00 PRIMER_RIGHT_7_SELF_ANY=4.00 PRIMER_LEFT_7_SELF_END=3.00 PRIMER_RIGHT_7_SELF_END=2.00 PRIMER_LEFT_7_MISPRIMING_SCORE=11.00, Tigger1 Autonomous DNA transposon PRIMER_RIGHT_7_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_7_MISPRIMING_SCORE=22.00, Tigger1 Autonomous DNA transposon PRIMER_LEFT_7_END_STABILITY=6.7000 PRIMER_RIGHT_7_END_STABILITY=8.1000 PRIMER_PAIR_7_COMPL_ANY=3.00 PRIMER_PAIR_7_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_7=643 PRIMER_PAIR_PENALTY_8=0.0465 PRIMER_LEFT_8_PENALTY=0.006308 PRIMER_RIGHT_8_PENALTY=0.040223 PRIMER_LEFT_8_SEQUENCE=CAGAATGGGATTGGTTATGTGTT PRIMER_RIGHT_8_SEQUENCE=CATCCAGAGTAGTGGAAGGTTTG PRIMER_LEFT_8=1175,23 PRIMER_RIGHT_8=1943,23 PRIMER_LEFT_8_TM=59.994 PRIMER_RIGHT_8_TM=60.040 PRIMER_LEFT_8_GC_PERCENT=39.130 PRIMER_RIGHT_8_GC_PERCENT=47.826 PRIMER_LEFT_8_SELF_ANY=3.00 PRIMER_RIGHT_8_SELF_ANY=4.00 PRIMER_LEFT_8_SELF_END=0.00 PRIMER_RIGHT_8_SELF_END=0.00 PRIMER_LEFT_8_MISPRIMING_SCORE=11.00, MER4C a consensus PRIMER_RIGHT_8_MISPRIMING_SCORE=12.00, reverse L1MA2 3'-end of L1 repeat (subfamily L1MA2) - a consensus sequence PRIMER_PAIR_8_MISPRIMING_SCORE=22.00, reverse L1MA2 3'-end of L1 repeat (subfamily L1MA2) - a consensus sequence PRIMER_LEFT_8_END_STABILITY=6.4000 PRIMER_RIGHT_8_END_STABILITY=7.0000 PRIMER_PAIR_8_COMPL_ANY=4.00 PRIMER_PAIR_8_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_8=769 PRIMER_PAIR_PENALTY_9=0.0490 PRIMER_LEFT_9_PENALTY=0.040223 PRIMER_RIGHT_9_PENALTY=0.008825 PRIMER_LEFT_9_SEQUENCE=CAAACCTTCCACTACTCTGGATG PRIMER_RIGHT_9_SEQUENCE=AGTGGAGATAAAAGGGACCTCTG PRIMER_LEFT_9=1921,23 PRIMER_RIGHT_9=2139,23 PRIMER_LEFT_9_TM=60.040 PRIMER_RIGHT_9_TM=60.009 PRIMER_LEFT_9_GC_PERCENT=47.826 PRIMER_RIGHT_9_GC_PERCENT=47.826 PRIMER_LEFT_9_SELF_ANY=4.00 PRIMER_RIGHT_9_SELF_ANY=4.00 PRIMER_LEFT_9_SELF_END=3.00 PRIMER_RIGHT_9_SELF_END=2.00 PRIMER_LEFT_9_MISPRIMING_SCORE=12.00, LTR12 LTR from human ERV9 endogenous retroviral sequence (HRES-1/1) PRIMER_RIGHT_9_MISPRIMING_SCORE=12.00, reverse L1MA2 3'-end of L1 repeat (subfamily L1MA2) - a consensus sequence PRIMER_PAIR_9_MISPRIMING_SCORE=22.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_9_END_STABILITY=8.1000 PRIMER_RIGHT_9_END_STABILITY=6.7000 PRIMER_PAIR_9_COMPL_ANY=6.00 PRIMER_PAIR_9_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_9=219 PRIMER_PAIR_PENALTY_10=0.0496 PRIMER_LEFT_10_PENALTY=0.013200 PRIMER_RIGHT_10_PENALTY=0.036444 PRIMER_LEFT_10_SEQUENCE=AGTGCCAGTTACTCTGCCTACAG PRIMER_RIGHT_10_SEQUENCE=TGCTTTTACACCATAGCTCCATT PRIMER_LEFT_10=2357,23 PRIMER_RIGHT_10=2759,23 PRIMER_LEFT_10_TM=60.013 PRIMER_RIGHT_10_TM=60.036 PRIMER_LEFT_10_GC_PERCENT=52.174 PRIMER_RIGHT_10_GC_PERCENT=39.130 PRIMER_LEFT_10_SELF_ANY=5.00 PRIMER_RIGHT_10_SELF_ANY=4.00 PRIMER_LEFT_10_SELF_END=2.00 PRIMER_RIGHT_10_SELF_END=1.00 PRIMER_LEFT_10_MISPRIMING_SCORE=12.00, reverse BSR Human beta satellite DNA - a consensus PRIMER_RIGHT_10_MISPRIMING_SCORE=12.00, MER33 Nonautonomous DNA transposon PRIMER_PAIR_10_MISPRIMING_SCORE=21.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_10_END_STABILITY=5.7000 PRIMER_RIGHT_10_END_STABILITY=8.4000 PRIMER_PAIR_10_COMPL_ANY=3.00 PRIMER_PAIR_10_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_10=403 PRIMER_PAIR_PENALTY_11=0.0496 PRIMER_LEFT_11_PENALTY=0.013200 PRIMER_RIGHT_11_PENALTY=0.036444 PRIMER_LEFT_11_SEQUENCE=AGTGCCAGTTACTCTGCCTACAG PRIMER_RIGHT_11_SEQUENCE=TTGCTTTTACACCATAGCTCCAT PRIMER_LEFT_11=2357,23 PRIMER_RIGHT_11=2760,23 PRIMER_LEFT_11_TM=60.013 PRIMER_RIGHT_11_TM=60.036 PRIMER_LEFT_11_GC_PERCENT=52.174 PRIMER_RIGHT_11_GC_PERCENT=39.130 PRIMER_LEFT_11_SELF_ANY=5.00 PRIMER_RIGHT_11_SELF_ANY=4.00 PRIMER_LEFT_11_SELF_END=2.00 PRIMER_RIGHT_11_SELF_END=2.00 PRIMER_LEFT_11_MISPRIMING_SCORE=12.00, reverse BSR Human beta satellite DNA - a consensus PRIMER_RIGHT_11_MISPRIMING_SCORE=12.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_11_MISPRIMING_SCORE=22.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_11_END_STABILITY=5.7000 PRIMER_RIGHT_11_END_STABILITY=8.1000 PRIMER_PAIR_11_COMPL_ANY=3.00 PRIMER_PAIR_11_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_11=404 PRIMER_PAIR_PENALTY_12=0.0532 PRIMER_LEFT_12_PENALTY=0.020535 PRIMER_RIGHT_12_PENALTY=0.032699 PRIMER_LEFT_12_SEQUENCE=ATCCTATCCAAAGCTGATTCACA PRIMER_RIGHT_12_SEQUENCE=CTCCCAACCTTAGCTTAAATCGT PRIMER_LEFT_12=3109,23 PRIMER_RIGHT_12=3478,23 PRIMER_LEFT_12_TM=59.979 PRIMER_RIGHT_12_TM=60.033 PRIMER_LEFT_12_GC_PERCENT=39.130 PRIMER_RIGHT_12_GC_PERCENT=43.478 PRIMER_LEFT_12_SELF_ANY=5.00 PRIMER_RIGHT_12_SELF_ANY=5.00 PRIMER_LEFT_12_SELF_END=1.00 PRIMER_RIGHT_12_SELF_END=1.00 PRIMER_LEFT_12_MISPRIMING_SCORE=12.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_RIGHT_12_MISPRIMING_SCORE=11.00, reverse HSATI Human satellite I DNA HinfI fragment PRIMER_PAIR_12_MISPRIMING_SCORE=19.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_LEFT_12_END_STABILITY=6.7000 PRIMER_RIGHT_12_END_STABILITY=8.0000 PRIMER_PAIR_12_COMPL_ANY=5.00 PRIMER_PAIR_12_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_12=370 PRIMER_PAIR_PENALTY_13=0.0534 PRIMER_LEFT_13_PENALTY=0.040223 PRIMER_RIGHT_13_PENALTY=0.013200 PRIMER_LEFT_13_SEQUENCE=CAAACCTTCCACTACTCTGGATG PRIMER_RIGHT_13_SEQUENCE=CTGTAGGCAGAGTAACTGGCACT PRIMER_LEFT_13=1921,23 PRIMER_RIGHT_13=2379,23 PRIMER_LEFT_13_TM=60.040 PRIMER_RIGHT_13_TM=60.013 PRIMER_LEFT_13_GC_PERCENT=47.826 PRIMER_RIGHT_13_GC_PERCENT=52.174 PRIMER_LEFT_13_SELF_ANY=4.00 PRIMER_RIGHT_13_SELF_ANY=5.00 PRIMER_LEFT_13_SELF_END=3.00 PRIMER_RIGHT_13_SELF_END=3.00 PRIMER_LEFT_13_MISPRIMING_SCORE=12.00, LTR12 LTR from human ERV9 endogenous retroviral sequence (HRES-1/1) PRIMER_RIGHT_13_MISPRIMING_SCORE=12.00, reverse MLT1d (MLT1d subfamily) - consensus sequence PRIMER_PAIR_13_MISPRIMING_SCORE=23.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_13_END_STABILITY=8.1000 PRIMER_RIGHT_13_END_STABILITY=7.9000 PRIMER_PAIR_13_COMPL_ANY=7.00 PRIMER_PAIR_13_COMPL_END=3.00 PRIMER_PRODUCT_SIZE_13=459 PRIMER_PAIR_PENALTY_14=0.0570 PRIMER_LEFT_14_PENALTY=0.036444 PRIMER_RIGHT_14_PENALTY=0.020535 PRIMER_LEFT_14_SEQUENCE=ATGGAGCTATGGTGTAAAAGCAA PRIMER_RIGHT_14_SEQUENCE=TGTGAATCAGCTTTGGATAGGAT PRIMER_LEFT_14=2738,23 PRIMER_RIGHT_14=3131,23 PRIMER_LEFT_14_TM=60.036 PRIMER_RIGHT_14_TM=59.979 PRIMER_LEFT_14_GC_PERCENT=39.130 PRIMER_RIGHT_14_GC_PERCENT=39.130 PRIMER_LEFT_14_SELF_ANY=4.00 PRIMER_RIGHT_14_SELF_ANY=5.00 PRIMER_LEFT_14_SELF_END=1.00 PRIMER_RIGHT_14_SELF_END=2.00 PRIMER_LEFT_14_MISPRIMING_SCORE=12.00, HSATI Human satellite I DNA HinfI fragment PRIMER_RIGHT_14_MISPRIMING_SCORE=11.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_PAIR_14_MISPRIMING_SCORE=21.00, L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_LEFT_14_END_STABILITY=8.5000 PRIMER_RIGHT_14_END_STABILITY=7.8000 PRIMER_PAIR_14_COMPL_ANY=5.00 PRIMER_PAIR_14_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_14=394 PRIMER_PAIR_PENALTY_15=0.0601 PRIMER_LEFT_15_PENALTY=0.053769 PRIMER_RIGHT_15_PENALTY=0.006308 PRIMER_LEFT_15_SEQUENCE=ATTGATTGCAGTCAGAAGGTTGT PRIMER_RIGHT_15_SEQUENCE=AACACATAACCAATCCCATTCTG PRIMER_LEFT_15=866,23 PRIMER_RIGHT_15=1197,23 PRIMER_LEFT_15_TM=60.054 PRIMER_RIGHT_15_TM=59.994 PRIMER_LEFT_15_GC_PERCENT=39.130 PRIMER_RIGHT_15_GC_PERCENT=39.130 PRIMER_LEFT_15_SELF_ANY=8.00 PRIMER_RIGHT_15_SELF_ANY=3.00 PRIMER_LEFT_15_SELF_END=2.00 PRIMER_RIGHT_15_SELF_END=1.00 PRIMER_LEFT_15_MISPRIMING_SCORE=11.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_15_MISPRIMING_SCORE=11.00, MLT1a (MLT1a subfamily) - consensus sequence PRIMER_PAIR_15_MISPRIMING_SCORE=20.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_15_END_STABILITY=6.4000 PRIMER_RIGHT_15_END_STABILITY=7.0000 PRIMER_PAIR_15_COMPL_ANY=5.00 PRIMER_PAIR_15_COMPL_END=3.00 PRIMER_PRODUCT_SIZE_15=332 PRIMER_PAIR_PENALTY_16=0.0601 PRIMER_LEFT_16_PENALTY=0.053769 PRIMER_RIGHT_16_PENALTY=0.006308 PRIMER_LEFT_16_SEQUENCE=ACATTGATTGCAGTCAGAAGGTT PRIMER_RIGHT_16_SEQUENCE=AACACATAACCAATCCCATTCTG PRIMER_LEFT_16=864,23 PRIMER_RIGHT_16=1197,23 PRIMER_LEFT_16_TM=60.054 PRIMER_RIGHT_16_TM=59.994 PRIMER_LEFT_16_GC_PERCENT=39.130 PRIMER_RIGHT_16_GC_PERCENT=39.130 PRIMER_LEFT_16_SELF_ANY=8.00 PRIMER_RIGHT_16_SELF_ANY=3.00 PRIMER_LEFT_16_SELF_END=2.00 PRIMER_RIGHT_16_SELF_END=1.00 PRIMER_LEFT_16_MISPRIMING_SCORE=11.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_16_MISPRIMING_SCORE=11.00, MLT1a (MLT1a subfamily) - consensus sequence PRIMER_PAIR_16_MISPRIMING_SCORE=21.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_16_END_STABILITY=7.9000 PRIMER_RIGHT_16_END_STABILITY=7.0000 PRIMER_PAIR_16_COMPL_ANY=5.00 PRIMER_PAIR_16_COMPL_END=3.00 PRIMER_PRODUCT_SIZE_16=334 PRIMER_PAIR_PENALTY_17=0.0629 PRIMER_LEFT_17_PENALTY=0.006308 PRIMER_RIGHT_17_PENALTY=0.056582 PRIMER_LEFT_17_SEQUENCE=CAGAATGGGATTGGTTATGTGTT PRIMER_RIGHT_17_SEQUENCE=AGAGAAGGAACGCTTGAGCTTAT PRIMER_LEFT_17=1175,23 PRIMER_RIGHT_17=1834,23 PRIMER_LEFT_17_TM=59.994 PRIMER_RIGHT_17_TM=60.057 PRIMER_LEFT_17_GC_PERCENT=39.130 PRIMER_RIGHT_17_GC_PERCENT=43.478 PRIMER_LEFT_17_SELF_ANY=3.00 PRIMER_RIGHT_17_SELF_ANY=4.00 PRIMER_LEFT_17_SELF_END=0.00 PRIMER_RIGHT_17_SELF_END=2.00 PRIMER_LEFT_17_MISPRIMING_SCORE=11.00, MER4C a consensus PRIMER_RIGHT_17_MISPRIMING_SCORE=11.00, MER34 a consensus PRIMER_PAIR_17_MISPRIMING_SCORE=21.00, reverse L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_LEFT_17_END_STABILITY=6.4000 PRIMER_RIGHT_17_END_STABILITY=5.9000 PRIMER_PAIR_17_COMPL_ANY=3.00 PRIMER_PAIR_17_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_17=660 PRIMER_PAIR_PENALTY_18=0.0691 PRIMER_LEFT_18_PENALTY=0.036444 PRIMER_RIGHT_18_PENALTY=0.032699 PRIMER_LEFT_18_SEQUENCE=ATGGAGCTATGGTGTAAAAGCAA PRIMER_RIGHT_18_SEQUENCE=CTCCCAACCTTAGCTTAAATCGT PRIMER_LEFT_18=2738,23 PRIMER_RIGHT_18=3478,23 PRIMER_LEFT_18_TM=60.036 PRIMER_RIGHT_18_TM=60.033 PRIMER_LEFT_18_GC_PERCENT=39.130 PRIMER_RIGHT_18_GC_PERCENT=43.478 PRIMER_LEFT_18_SELF_ANY=4.00 PRIMER_RIGHT_18_SELF_ANY=5.00 PRIMER_LEFT_18_SELF_END=1.00 PRIMER_RIGHT_18_SELF_END=1.00 PRIMER_LEFT_18_MISPRIMING_SCORE=12.00, HSATI Human satellite I DNA HinfI fragment PRIMER_RIGHT_18_MISPRIMING_SCORE=11.00, reverse HSATI Human satellite I DNA HinfI fragment PRIMER_PAIR_18_MISPRIMING_SCORE=22.00, reverse HSATI Human satellite I DNA HinfI fragment PRIMER_LEFT_18_END_STABILITY=8.5000 PRIMER_RIGHT_18_END_STABILITY=8.0000 PRIMER_PAIR_18_COMPL_ANY=7.00 PRIMER_PAIR_18_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_18=741 PRIMER_PAIR_PENALTY_19=0.0698 PRIMER_LEFT_19_PENALTY=0.056582 PRIMER_RIGHT_19_PENALTY=0.013200 PRIMER_LEFT_19_SEQUENCE=ATAAGCTCAAGCGTTCCTTCTCT PRIMER_RIGHT_19_SEQUENCE=CTGTAGGCAGAGTAACTGGCACT PRIMER_LEFT_19=1812,23 PRIMER_RIGHT_19=2379,23 PRIMER_LEFT_19_TM=60.057 PRIMER_RIGHT_19_TM=60.013 PRIMER_LEFT_19_GC_PERCENT=43.478 PRIMER_RIGHT_19_GC_PERCENT=52.174 PRIMER_LEFT_19_SELF_ANY=4.00 PRIMER_RIGHT_19_SELF_ANY=5.00 PRIMER_LEFT_19_SELF_END=0.00 PRIMER_RIGHT_19_SELF_END=3.00 PRIMER_LEFT_19_MISPRIMING_SCORE=12.00, reverse LTR13 LTR from a putative human endogenous retrovirus PRIMER_RIGHT_19_MISPRIMING_SCORE=12.00, reverse MLT1d (MLT1d subfamily) - consensus sequence PRIMER_PAIR_19_MISPRIMING_SCORE=22.00, reverse L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_LEFT_19_END_STABILITY=6.4000 PRIMER_RIGHT_19_END_STABILITY=7.9000 PRIMER_PAIR_19_COMPL_ANY=4.00 PRIMER_PAIR_19_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_19=568 =