PRIMER_SEQUENCE_ID=NM_080876 SEQUENCE=AGCGGGGTGGGATAAACGGAGCTGGACGACTCAGTCTCTTGGTCTGTGGCTGCTGCGGTTACCTGGATGGGCGAGCACCTCTGAGGCTGGCTTTGTTACCTGGGCAATAAGGGACTAGCAGTTCAGCCGTTTTCTATGCCTGCTGGATTTGTTTGTATTTGTTCCCAGCCACTGCTCATGTAATGTACTCCCTTAACCAGGAAATTAAAGCATTCTCCCGGAATAATCTCAGGAAGCAATGCACCAGGGTGACAACGCTAACTGGAAAGAAAATTATAGAAACATGGAAAGATGCCAGAATTCATGTTGTGGAAGAAGTAGAGCCGAGCAGTGGGGGTGGTTGTGGTTATGTGCAGGACCTTAGCTCGGACCTGCAAGTTGGCGTTATTAAGCCATGGTTGCTCCTAGGGTCACAAGATGCTGCTCATGATTTGGATACACTGAAAAAGAATAAGGTGACTCATATTCTTAATGTTGCATATGGAGTTGAAAATGCTTTCCTCAGTGACTTTACATATAAGAGCATTTCTATATTGGATCTGCCTGAAACCAACATCCTGTCTTATTTTCCAGAATGTTTTGAATTTATTGAAGAAGCAAAAAGAAAAGATGGAGTGGTTCTTGTTCATTGTAATGCAGGCGTTTCCAGGGCTGCTGCAATTGTAATAGGTTTCCTGATGAATTCTGAACAAACCTCATTTACCAGTGCTTTTTCTTTGGTGAAAAATGCAAGACCTTCCATATGTCCAAATTCTGGCTTCATGGAGCAGCTTCGTACATATCAAGAGGGCAAAGAAAGCAATAAGTGTGACAGAATACAGGAGAACAGTTCATGAGTTGCATTGTAGCAGACAATGGACAACTGTAGTTTCTGAATTGACTTCTATAGCCATCTTTTCCCTTTTTTGGAGAGTAGACTAGCAAAACTCCCTTTTTTCTCTTGCCTTTTTTATGCATAAATGGAGGTCAATCTGATTGTCCTGACCTACTGTATAAGTAAATTTCAAATGTCATTACTTTCTCTTTGTTATTATAATGTGTGATTAAATGCTTTTTTAAATTGCTAAGGGAAAATAACAAAGTGTTAGTAATCATTGCTTTCTGTAGAAGAAAAAGGTTTAAATTTAAAATGTGTATTTAGAGCATGGAGAGAATCATTTAATGAAGCCTATTTTTCTGTTCCAGCAACTGTTTTTATGAAAGAAAAACTTGAAATGCTACTTAACTTACTATTTCAAAGGGAAGTATATTTCTTTTTAAAGAATCTTTTTAAGATTAAAAATGAATACCTTAAATCTCCCAAAAGAGATAACCAGTATCTGAAGGTTTATACAATATTTACACAGTGGCTACAATATTCACAAAATTCTTATGTTCTCTTATGAAAAATATACACTTTTCATTTTGTCTTCTTCTTTTTTTTTTTTTTTTAGATGGAGTTTGGCTCTTGTCACCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAGCCTCTGCCTCCCGGGTTCAAGCGATTCTCCTGCTCCAGCCTCCCATATAGCTGGGATTATAGGTGCCTGCCACCATGCCCGGCTAATTTTTGTGTTTTTTAGTAGAGATGGAGTCTCACCACATAGGCCAGGCAGTCTCGAACTCCTGACCTCAGGTGATCCACCCACCTTGGCCTCTCTAAATGCTGGGATTGCAGGCGTGAGCCACTGCATCCGACCTCATTTTGTTTTTTTCAATTCTGTTATCGGCATTTCTTTCTTTTTTTTTTTAATGTATAGGTGTTCTGTCATACGTTATTGTGAGCTTTGGTTCTTTGAACAGGTGATCTATTCTCTTACATTTTGTGCTTTTTATCTTGGGTGCCTAGCATTCTGTTTTTTTGATCCTATGTCATAATTTTTTGAGAAAATGTTTGATACTGCAAGATCATTGTTTAGTGGTCTGTTTTCTACTTCAGTATTCTACCAGAGAACATATTTTTTAGGGGAGAAGGGTTATGGTTTTGTAAGAAACTTTAAATATACTTTTAGGAGACCCACAATCATTTACAGTTTTATCTTTGGCCTTTGAATAGGTTCTTTTTTCTTTAATGTCTCCGTATTTGCAGAACTGAGCTCTGTACGTTATAAATTTGCTTAAAGATTTTGATTTTTTCTTCAGAATATGGTATACTTAAAATTAATTAATTAAGACAGTTTCTTTTTTCTTTTCTTTTTTTTTTTTTCGAGACAGGGTCTTGCTCTGTCACCTAGGCTAGAGTGGAGTGGCATGAACACAACGCACTGCAGCCTCTACCTCCTGGGCTCAAGCAGTCCTCCCACCTCAGTCTCCTGAGTAGCTGAGACTACAGCTGTGCGCCACCACATCTGGCTAATTTTATTTTTATTTTTGTAGAGACAGGAGTCTTGCCATGTTGCCCAGGCTGATCTCAAACTCCTAGGCTTAAGTGATCCTCCCGCCTTAGCCTCCCAAGTGCTAGGATTACAGGCATCAGCCACCACGCCTGGCCTGATAGTTTCCACATAGTTTTTCATGACTTAGAAGATATCATTGCCATGTAGGTTTTATTTTTAAAAGTCTTGAGCTCTTCTTAAATATACATTATAAAGAGCAAGCATAGATGGAAAGTGCATATTGAACACATCTGTGCATTTGAGAAGGCAGGCTTTCATATGCTGTCATGAGCAAAAAGTAGAAGTGATAAATGCAAGTTATGTTTTGAGATTGCTTACACCGTGACAAGATGCCATCACTTGTGATGTTATGAACTGTTATAAACTCTTTGCTTCTGCTAAGAAGCAGTCTAAATATAATCAACGTACAGTGAGCTCTTTGAAGCCAACCAAGGCAGGCAGAACCCTCTTAAATATGAGACTGATGTATAGGTTCTCTCTATGGTCAGTATCACTGGATAAGCCTTCTCCTTTCATAAGAAAGGATGTATTTAAATACATTTTATTTTGCTAAATCCTGTTTAGTTTTCAGCCATTAAATGTCACATGAAGCCTTGATAGAATTTGTTCATAATGGCTCATGTATTATTATTATTTTTGAGATGGAGTTTTGCTCTTAATGATATTATTATTATTTGAGACAGAGTTTTGCTCTTATTGCCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCGGCCTCTGCCTCCCGGCTTCAAGCGATTCTCCTGTATCGGCCTCCCAGGTAGCTGGGATTATAGGCGTGTGCCACCATGCCCAGCAAATTTTGTATTTTTTTTTGGTAGAGACAGGGTTCAACCGTGTTGGTCAGGCTGGTCTCGAACTCCTGACCGCAAGTGATCCACACGCCTTGGTCTCCCAAAGTGCTGGGATTACGGTGTTAGCCACTACACCTGGCCTGGATTGTGTATTATTTATGTCTGTAGTTTATATGCTTAGTTGTTGCCTATAGTGATCTGGGTAAGATTCAAACATTTATCTTTTGTATCTTCTACAGAAGTGCTTTGAGCATCAAATTTGTTTTAACGTTAAATTGTAGTTTGCTGTATTAAAATAGATCAATGAATATAATTCAGTCTTTTAGGGGCACCAAGTAAAGCATAAGGTCATATATACTATACAATATGTTTATTGCACTTCCCATGGGGATAAATCACTCTGTCATTCCTAGTTATTTTAAAAAAAGAACTTTATGATTACGGTCCTCTTTCTCACATACTGCAAACTTAAAAGATACATACACCAAATATAGGTCTGTTTTAAAGGAGAGGAAAAATAGTTCAAGGAGTTTTTGCCTCTTTGTTTTTAAATAGATTATTCTGCCATTTTTTAAAGGAAAGGGAAAATGAAAACAGCATGTCTTTTTAAACATTGAAAAGAAATATGGAGGCTTTAAACCGCAAACTGAAAAAGCTGAGTAGAACAAAGGCAGTGGAGCATACAATACAATTCTATTTATTTGAGGTTAATTGAAGTTAATAATTTTTAAATTTTTTTCTAATTTTATGCCTTAAAATAGGTTTCTGATTACATAAAATTTGAATAGAACACTCAAGAAGTATGTAGATTTTTGAAAAACCCAAACAATATTCTTCTTAGATTTTTGGAGGCAAAATTTAGACCAGTATACTAATTCAAAAGACAAATATTTCAGAGGAAGTGGAGTATAGTATTTAACATTTTGTTTGCAATTTTACTTTTTCTTCCCTTCTTCCCTATTGAACCTTGATTAAAATGTATGAATACAATACTTGGATTTTTTTTTCAGCTTAGACTCTGATAATTTCAGTGGTAGTGGGGAAACCTGAATTTGTCAGCATGATTATTTGTAACTCAGATTGTTCAAATGTATATAGAAGGTCCCCTTCAAGTGTTGTTTCTCCAAGTAGTCATAAATGTAGCAAGTATAAATCAGAATATCATCTTATAATCTTACAGAGTTAACCTAATGAGTCAATACCTTTATAAGCAAAACCATGATAAATTTAAAAACAACAGAAATGTGGCATGATTACTTATTTATTTGTTCCAGGTGACTCTAAATAGTTGATTTTTCTGCCTGAAGGATCCTGAACATATTTAGTTACCCTGTAGTTATTTAGGAATTTAAACCAGAAGACTTTGAAGTTGTATATTCTTGCAATGCATAAAATGACATTATAATCAACAAACTTATGGTTTGTTTCAATTGATGCACACAAAAAATAACTTATAGTTAGACTTTTCTATTTCAAGTAAAGCTTTGAGTTACTTATTTTTATACATATTCATCATGTACCCTTTATTGTTTCTAGGTGTTGATATACTTTAATAAAAATGATATGTTTAATATTTTCCCATTAATATATTTCTTTGAAGCTATTTGTTTTAAAAGATGTAACACTTATTTGCTGTCAAATTCTGAATTAAAAAATCTGTTGGTGGCCGGGCGCAGTGGCTCATGCCTGTGGTCCCAACATTTTGGGAGGCCAAGGAGATGGATCACTTGAGGCCAGGAGTTCGAGACCAGCCTGGCCAACATGGCAAAACCCCATCACTAAAAATACAAAAATTACCCGGGCATGGTGGTGGGTGCCTGTAATCCCAGCTTCTTAGGAGGCTGAGGTAGGAGAATTGCTTGACCCTGGGAGGTGGAGGTGGCAGTGAGCCGAGATAGCACCACTGCACTTCTAGTTGACAGAGTGAGACTCTGACTCAAAAAAAAAAAAAAAA PRIMER_OPT_SIZE=23 PRIMER_MIN_SIZE=15 PRIMER_MAX_SIZE=26 PRIMER_MISPRIMING_LIBRARY=Human_rep_in_fasta.txt PRIMER_NUM_RETURN=20 PRIMER_NUM_NS_ACCEPTED=1 PRIMER_PRODUCT_SIZE_RANGE=100-999 PRIMER_EXPLAIN_FLAG=1 PRIMER_LEFT_EXPLAIN=considered 58111, GC content failed 6214, low tm 32548, high tm 9454, high any compl 31, high end compl 59, high repeat similarity 69, long poly-x seq 412, ok 9324 PRIMER_RIGHT_EXPLAIN=considered 58052, GC content failed 6270, low tm 32696, high tm 9206, high any compl 3, high end compl 6, high repeat similarity 13, long poly-x seq 429, ok 9429 PRIMER_PAIR_EXPLAIN=considered 1147, unacceptable product size 1074, high end compl 8, ok 65 PRIMER_PAIR_PENALTY=0.0226 PRIMER_LEFT_PENALTY=0.008837 PRIMER_RIGHT_PENALTY=0.013803 PRIMER_LEFT_SEQUENCE=GAGATGGAGTCTCACCACATAGG PRIMER_RIGHT_SEQUENCE=AAGAACCTATTCAAAGGCCAAAG PRIMER_LEFT=1598,23 PRIMER_RIGHT=2074,23 PRIMER_LEFT_TM=60.009 PRIMER_RIGHT_TM=60.014 PRIMER_LEFT_GC_PERCENT=52.174 PRIMER_RIGHT_GC_PERCENT=39.130 PRIMER_LEFT_SELF_ANY=5.00 PRIMER_RIGHT_SELF_ANY=5.00 PRIMER_LEFT_SELF_END=2.00 PRIMER_RIGHT_SELF_END=0.00 PRIMER_LEFT_MISPRIMING_SCORE=12.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_MISPRIMING_SCORE=12.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_MISPRIMING_SCORE=24.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_END_STABILITY=7.1000 PRIMER_RIGHT_END_STABILITY=7.3000 PRIMER_PAIR_COMPL_ANY=5.00 PRIMER_PAIR_COMPL_END=2.00 PRIMER_PRODUCT_SIZE=477 PRIMER_PAIR_PENALTY_1=0.0258 PRIMER_LEFT_1_PENALTY=0.008837 PRIMER_RIGHT_1_PENALTY=0.016975 PRIMER_LEFT_1_SEQUENCE=GAGATGGAGTCTCACCACATAGG PRIMER_RIGHT_1_SEQUENCE=AGAAATGCCGATAACAGAATTGA PRIMER_LEFT_1=1598,23 PRIMER_RIGHT_1=1749,23 PRIMER_LEFT_1_TM=60.009 PRIMER_RIGHT_1_TM=59.983 PRIMER_LEFT_1_GC_PERCENT=52.174 PRIMER_RIGHT_1_GC_PERCENT=34.783 PRIMER_LEFT_1_SELF_ANY=5.00 PRIMER_RIGHT_1_SELF_ANY=6.00 PRIMER_LEFT_1_SELF_END=2.00 PRIMER_RIGHT_1_SELF_END=2.00 PRIMER_LEFT_1_MISPRIMING_SCORE=12.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_1_MISPRIMING_SCORE=12.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_1_MISPRIMING_SCORE=24.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_1_END_STABILITY=7.1000 PRIMER_RIGHT_1_END_STABILITY=6.9000 PRIMER_PAIR_1_COMPL_ANY=3.00 PRIMER_PAIR_1_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_1=152 PRIMER_PAIR_PENALTY_2=0.0263 PRIMER_LEFT_2_PENALTY=0.000316 PRIMER_RIGHT_2_PENALTY=0.026007 PRIMER_LEFT_2_SEQUENCE=TTATTAAGCCATGGTTGCTCCTA PRIMER_RIGHT_2_SEQUENCE=TGAACAAGAACCACTCCATCTTT PRIMER_LEFT_2=384,23 PRIMER_RIGHT_2=627,23 PRIMER_LEFT_2_TM=60.000 PRIMER_RIGHT_2_TM=60.026 PRIMER_LEFT_2_GC_PERCENT=39.130 PRIMER_RIGHT_2_GC_PERCENT=39.130 PRIMER_LEFT_2_SELF_ANY=6.00 PRIMER_RIGHT_2_SELF_ANY=4.00 PRIMER_LEFT_2_SELF_END=2.00 PRIMER_RIGHT_2_SELF_END=1.00 PRIMER_LEFT_2_MISPRIMING_SCORE=12.00, reverse HSATI Human satellite I DNA HinfI fragment PRIMER_RIGHT_2_MISPRIMING_SCORE=11.00, MLT1R MLT1-Mammalian LTR retrotransposon internal sequence - a consensus PRIMER_PAIR_2_MISPRIMING_SCORE=21.00, reverse HSATI Human satellite I DNA HinfI fragment PRIMER_LEFT_2_END_STABILITY=7.2000 PRIMER_RIGHT_2_END_STABILITY=7.0000 PRIMER_PAIR_2_COMPL_ANY=5.00 PRIMER_PAIR_2_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_2=244 PRIMER_PAIR_PENALTY_3=0.0561 PRIMER_LEFT_3_PENALTY=0.030113 PRIMER_RIGHT_3_PENALTY=0.026007 PRIMER_LEFT_3_SEQUENCE=GACGACTCAGTCTCTTGGTCTGT PRIMER_RIGHT_3_SEQUENCE=TGAACAAGAACCACTCCATCTTT PRIMER_LEFT_3=24,23 PRIMER_RIGHT_3=627,23 PRIMER_LEFT_3_TM=59.970 PRIMER_RIGHT_3_TM=60.026 PRIMER_LEFT_3_GC_PERCENT=52.174 PRIMER_RIGHT_3_GC_PERCENT=39.130 PRIMER_LEFT_3_SELF_ANY=7.00 PRIMER_RIGHT_3_SELF_ANY=4.00 PRIMER_LEFT_3_SELF_END=3.00 PRIMER_RIGHT_3_SELF_END=1.00 PRIMER_LEFT_3_MISPRIMING_SCORE=12.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_3_MISPRIMING_SCORE=11.00, MLT1R MLT1-Mammalian LTR retrotransposon internal sequence - a consensus PRIMER_PAIR_3_MISPRIMING_SCORE=22.00, reverse L1 Human L1 interspersed repetitive sequence - full length copy PRIMER_LEFT_3_END_STABILITY=6.4000 PRIMER_RIGHT_3_END_STABILITY=7.0000 PRIMER_PAIR_3_COMPL_ANY=6.00 PRIMER_PAIR_3_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_3=604 PRIMER_PAIR_PENALTY_4=0.0739 PRIMER_LEFT_4_PENALTY=0.000316 PRIMER_RIGHT_4_PENALTY=0.073619 PRIMER_LEFT_4_SEQUENCE=TTATTAAGCCATGGTTGCTCCTA PRIMER_RIGHT_4_SEQUENCE=GCACTGGTAAATGAGGTTTGTTC PRIMER_LEFT_4=384,23 PRIMER_RIGHT_4=708,23 PRIMER_LEFT_4_TM=60.000 PRIMER_RIGHT_4_TM=59.926 PRIMER_LEFT_4_GC_PERCENT=39.130 PRIMER_RIGHT_4_GC_PERCENT=43.478 PRIMER_LEFT_4_SELF_ANY=6.00 PRIMER_RIGHT_4_SELF_ANY=3.00 PRIMER_LEFT_4_SELF_END=2.00 PRIMER_RIGHT_4_SELF_END=0.00 PRIMER_LEFT_4_MISPRIMING_SCORE=12.00, reverse HSATI Human satellite I DNA HinfI fragment PRIMER_RIGHT_4_MISPRIMING_SCORE=12.00, reverse MER3 Nonautonomous DNA transposon PRIMER_PAIR_4_MISPRIMING_SCORE=21.00, reverse HSATI Human satellite I DNA HinfI fragment PRIMER_LEFT_4_END_STABILITY=7.2000 PRIMER_RIGHT_4_END_STABILITY=6.7000 PRIMER_PAIR_4_COMPL_ANY=4.00 PRIMER_PAIR_4_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_4=325 PRIMER_PAIR_PENALTY_5=0.0780 PRIMER_LEFT_5_PENALTY=0.073619 PRIMER_RIGHT_5_PENALTY=0.004430 PRIMER_LEFT_5_SEQUENCE=AGAGCAAGCATAGATGGAAAGTG PRIMER_RIGHT_5_SEQUENCE=AGGTGTAGTGGCTAACACCGTAA PRIMER_LEFT_5=2602,23 PRIMER_RIGHT_5=3365,23 PRIMER_LEFT_5_TM=59.926 PRIMER_RIGHT_5_TM=59.996 PRIMER_LEFT_5_GC_PERCENT=43.478 PRIMER_RIGHT_5_GC_PERCENT=47.826 PRIMER_LEFT_5_SELF_ANY=4.00 PRIMER_RIGHT_5_SELF_ANY=7.00 PRIMER_LEFT_5_SELF_END=0.00 PRIMER_RIGHT_5_SELF_END=1.00 PRIMER_LEFT_5_MISPRIMING_SCORE=11.00, L1MA2 3'-end of L1 repeat (subfamily L1MA2) - a consensus sequence PRIMER_RIGHT_5_MISPRIMING_SCORE=12.00, reverse HSATI Human satellite I DNA HinfI fragment PRIMER_PAIR_5_MISPRIMING_SCORE=21.00, MER4C a consensus PRIMER_LEFT_5_END_STABILITY=6.7000 PRIMER_RIGHT_5_END_STABILITY=7.7000 PRIMER_PAIR_5_COMPL_ANY=3.00 PRIMER_PAIR_5_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_5=764 PRIMER_PAIR_PENALTY_6=0.0804 PRIMER_LEFT_6_PENALTY=0.073619 PRIMER_RIGHT_6_PENALTY=0.006805 PRIMER_LEFT_6_SEQUENCE=AGAGCAAGCATAGATGGAAAGTG PRIMER_RIGHT_6_SEQUENCE=ATATTTAAGAGGGTTCTGCCTGC PRIMER_LEFT_6=2602,23 PRIMER_RIGHT_6=2864,23 PRIMER_LEFT_6_TM=59.926 PRIMER_RIGHT_6_TM=60.007 PRIMER_LEFT_6_GC_PERCENT=43.478 PRIMER_RIGHT_6_GC_PERCENT=43.478 PRIMER_LEFT_6_SELF_ANY=4.00 PRIMER_RIGHT_6_SELF_ANY=4.00 PRIMER_LEFT_6_SELF_END=0.00 PRIMER_RIGHT_6_SELF_END=2.00 PRIMER_LEFT_6_MISPRIMING_SCORE=11.00, L1MA2 3'-end of L1 repeat (subfamily L1MA2) - a consensus sequence PRIMER_RIGHT_6_MISPRIMING_SCORE=12.00, reverse MLT2D Interspersed repeat MLT2D - a consensus PRIMER_PAIR_6_MISPRIMING_SCORE=22.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_6_END_STABILITY=6.7000 PRIMER_RIGHT_6_END_STABILITY=9.7000 PRIMER_PAIR_6_COMPL_ANY=5.00 PRIMER_PAIR_6_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_6=263 PRIMER_PAIR_PENALTY_7=0.0996 PRIMER_LEFT_7_PENALTY=0.026007 PRIMER_RIGHT_7_PENALTY=0.073619 PRIMER_LEFT_7_SEQUENCE=AAAGATGGAGTGGTTCTTGTTCA PRIMER_RIGHT_7_SEQUENCE=GCACTGGTAAATGAGGTTTGTTC PRIMER_LEFT_7=605,23 PRIMER_RIGHT_7=708,23 PRIMER_LEFT_7_TM=60.026 PRIMER_RIGHT_7_TM=59.926 PRIMER_LEFT_7_GC_PERCENT=39.130 PRIMER_RIGHT_7_GC_PERCENT=43.478 PRIMER_LEFT_7_SELF_ANY=4.00 PRIMER_RIGHT_7_SELF_ANY=3.00 PRIMER_LEFT_7_SELF_END=2.00 PRIMER_RIGHT_7_SELF_END=0.00 PRIMER_LEFT_7_MISPRIMING_SCORE=12.00, MER41 Medium reiteration sequence MER41 PRIMER_RIGHT_7_MISPRIMING_SCORE=12.00, reverse MER3 Nonautonomous DNA transposon PRIMER_PAIR_7_MISPRIMING_SCORE=21.00, reverse MER39 a consensus PRIMER_LEFT_7_END_STABILITY=6.7000 PRIMER_RIGHT_7_END_STABILITY=6.7000 PRIMER_PAIR_7_COMPL_ANY=4.00 PRIMER_PAIR_7_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_7=104 PRIMER_PAIR_PENALTY_8=0.1037 PRIMER_LEFT_8_PENALTY=0.030113 PRIMER_RIGHT_8_PENALTY=0.073619 PRIMER_LEFT_8_SEQUENCE=GACGACTCAGTCTCTTGGTCTGT PRIMER_RIGHT_8_SEQUENCE=GCACTGGTAAATGAGGTTTGTTC PRIMER_LEFT_8=24,23 PRIMER_RIGHT_8=708,23 PRIMER_LEFT_8_TM=59.970 PRIMER_RIGHT_8_TM=59.926 PRIMER_LEFT_8_GC_PERCENT=52.174 PRIMER_RIGHT_8_GC_PERCENT=43.478 PRIMER_LEFT_8_SELF_ANY=7.00 PRIMER_RIGHT_8_SELF_ANY=3.00 PRIMER_LEFT_8_SELF_END=3.00 PRIMER_RIGHT_8_SELF_END=0.00 PRIMER_LEFT_8_MISPRIMING_SCORE=12.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_8_MISPRIMING_SCORE=12.00, reverse MER3 Nonautonomous DNA transposon PRIMER_PAIR_8_MISPRIMING_SCORE=21.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_8_END_STABILITY=6.4000 PRIMER_RIGHT_8_END_STABILITY=6.7000 PRIMER_PAIR_8_COMPL_ANY=4.00 PRIMER_PAIR_8_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_8=685 PRIMER_PAIR_PENALTY_9=0.1047 PRIMER_LEFT_9_PENALTY=0.094334 PRIMER_RIGHT_9_PENALTY=0.010384 PRIMER_LEFT_9_SEQUENCE=TTGTTGCCTATAGTGATCTGGGT PRIMER_RIGHT_9_SEQUENCE=TACTGGTCTAAATTTTGCCTCCA PRIMER_LEFT_9=3410,23 PRIMER_RIGHT_9=4097,23 PRIMER_LEFT_9_TM=59.906 PRIMER_RIGHT_9_TM=60.010 PRIMER_LEFT_9_GC_PERCENT=43.478 PRIMER_RIGHT_9_GC_PERCENT=39.130 PRIMER_LEFT_9_SELF_ANY=6.00 PRIMER_RIGHT_9_SELF_ANY=6.00 PRIMER_LEFT_9_SELF_END=0.00 PRIMER_RIGHT_9_SELF_END=2.00 PRIMER_LEFT_9_MISPRIMING_SCORE=11.00, L1MC2 3'-end of L1 repeat (subfamily L1MC2) - a consensus sequence PRIMER_RIGHT_9_MISPRIMING_SCORE=11.00, reverse L1ME2 3'-end of L1 repeat (subfamily L1ME2) - a consensus sequence PRIMER_PAIR_9_MISPRIMING_SCORE=22.00, reverse L1ME2 3'-end of L1 repeat (subfamily L1ME2) - a consensus sequence PRIMER_LEFT_9_END_STABILITY=9.4000 PRIMER_RIGHT_9_END_STABILITY=8.2000 PRIMER_PAIR_9_COMPL_ANY=3.00 PRIMER_PAIR_9_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_9=688 PRIMER_PAIR_PENALTY_10=0.1047 PRIMER_LEFT_10_PENALTY=0.094334 PRIMER_RIGHT_10_PENALTY=0.010384 PRIMER_LEFT_10_SEQUENCE=GTTGTTGCCTATAGTGATCTGGG PRIMER_RIGHT_10_SEQUENCE=TACTGGTCTAAATTTTGCCTCCA PRIMER_LEFT_10=3409,23 PRIMER_RIGHT_10=4097,23 PRIMER_LEFT_10_TM=59.906 PRIMER_RIGHT_10_TM=60.010 PRIMER_LEFT_10_GC_PERCENT=47.826 PRIMER_RIGHT_10_GC_PERCENT=39.130 PRIMER_LEFT_10_SELF_ANY=6.00 PRIMER_RIGHT_10_SELF_ANY=6.00 PRIMER_LEFT_10_SELF_END=1.00 PRIMER_RIGHT_10_SELF_END=2.00 PRIMER_LEFT_10_MISPRIMING_SCORE=12.00, L1MC2 3'-end of L1 repeat (subfamily L1MC2) - a consensus sequence PRIMER_RIGHT_10_MISPRIMING_SCORE=11.00, reverse L1ME2 3'-end of L1 repeat (subfamily L1ME2) - a consensus sequence PRIMER_PAIR_10_MISPRIMING_SCORE=22.00, reverse HSATI Human satellite I DNA HinfI fragment PRIMER_LEFT_10_END_STABILITY=9.7000 PRIMER_RIGHT_10_END_STABILITY=8.2000 PRIMER_PAIR_10_COMPL_ANY=3.00 PRIMER_PAIR_10_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_10=689 PRIMER_PAIR_PENALTY_11=0.1182 PRIMER_LEFT_11_PENALTY=0.000316 PRIMER_RIGHT_11_PENALTY=0.117879 PRIMER_LEFT_11_SEQUENCE=TTATTAAGCCATGGTTGCTCCTA PRIMER_RIGHT_11_SEQUENCE=CATTTTCAACTCCATATGCAACA PRIMER_LEFT_11=384,23 PRIMER_RIGHT_11=494,23 PRIMER_LEFT_11_TM=60.000 PRIMER_RIGHT_11_TM=59.882 PRIMER_LEFT_11_GC_PERCENT=39.130 PRIMER_RIGHT_11_GC_PERCENT=34.783 PRIMER_LEFT_11_SELF_ANY=6.00 PRIMER_RIGHT_11_SELF_ANY=6.00 PRIMER_LEFT_11_SELF_END=2.00 PRIMER_RIGHT_11_SELF_END=1.00 PRIMER_LEFT_11_MISPRIMING_SCORE=12.00, reverse HSATI Human satellite I DNA HinfI fragment PRIMER_RIGHT_11_MISPRIMING_SCORE=12.00, MER4C a consensus PRIMER_PAIR_11_MISPRIMING_SCORE=23.00, reverse HSATI Human satellite I DNA HinfI fragment PRIMER_LEFT_11_END_STABILITY=7.2000 PRIMER_RIGHT_11_END_STABILITY=7.0000 PRIMER_PAIR_11_COMPL_ANY=5.00 PRIMER_PAIR_11_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_11=111 PRIMER_PAIR_PENALTY_12=0.1195 PRIMER_LEFT_12_PENALTY=0.010384 PRIMER_RIGHT_12_PENALTY=0.109069 PRIMER_LEFT_12_SEQUENCE=TGGAGGCAAAATTTAGACCAGTA PRIMER_RIGHT_12_SEQUENCE=ATCATGCTGACAAATTCAGGTTT PRIMER_LEFT_12=4075,23 PRIMER_RIGHT_12=4293,23 PRIMER_LEFT_12_TM=60.010 PRIMER_RIGHT_12_TM=59.891 PRIMER_LEFT_12_GC_PERCENT=39.130 PRIMER_RIGHT_12_GC_PERCENT=34.783 PRIMER_LEFT_12_SELF_ANY=6.00 PRIMER_RIGHT_12_SELF_ANY=4.00 PRIMER_LEFT_12_SELF_END=2.00 PRIMER_RIGHT_12_SELF_END=1.00 PRIMER_LEFT_12_MISPRIMING_SCORE=11.00, reverse L1ME2 3'-end of L1 repeat (subfamily L1ME2) - a consensus sequence PRIMER_RIGHT_12_MISPRIMING_SCORE=11.00, LTR11 LTR from human HTLV-I related endogenous retroviral sequence (HRES-1/1) PRIMER_PAIR_12_MISPRIMING_SCORE=22.00, reverse HSATI Human satellite I DNA HinfI fragment PRIMER_LEFT_12_END_STABILITY=5.7000 PRIMER_RIGHT_12_END_STABILITY=8.2000 PRIMER_PAIR_12_COMPL_ANY=5.00 PRIMER_PAIR_12_COMPL_END=3.00 PRIMER_PRODUCT_SIZE_12=219 PRIMER_PAIR_PENALTY_13=0.1195 PRIMER_LEFT_13_PENALTY=0.010384 PRIMER_RIGHT_13_PENALTY=0.109069 PRIMER_LEFT_13_SEQUENCE=TGGAGGCAAAATTTAGACCAGTA PRIMER_RIGHT_13_SEQUENCE=AATCATGCTGACAAATTCAGGTT PRIMER_LEFT_13=4075,23 PRIMER_RIGHT_13=4294,23 PRIMER_LEFT_13_TM=60.010 PRIMER_RIGHT_13_TM=59.891 PRIMER_LEFT_13_GC_PERCENT=39.130 PRIMER_RIGHT_13_GC_PERCENT=34.783 PRIMER_LEFT_13_SELF_ANY=6.00 PRIMER_RIGHT_13_SELF_ANY=4.00 PRIMER_LEFT_13_SELF_END=2.00 PRIMER_RIGHT_13_SELF_END=2.00 PRIMER_LEFT_13_MISPRIMING_SCORE=11.00, reverse L1ME2 3'-end of L1 repeat (subfamily L1ME2) - a consensus sequence PRIMER_RIGHT_13_MISPRIMING_SCORE=12.00, MER41 Medium reiteration sequence MER41 PRIMER_PAIR_13_MISPRIMING_SCORE=21.00, reverse HSATI Human satellite I DNA HinfI fragment PRIMER_LEFT_13_END_STABILITY=5.7000 PRIMER_RIGHT_13_END_STABILITY=7.9000 PRIMER_PAIR_13_COMPL_ANY=5.00 PRIMER_PAIR_13_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_13=220 PRIMER_PAIR_PENALTY_14=0.1392 PRIMER_LEFT_14_PENALTY=0.030113 PRIMER_RIGHT_14_PENALTY=0.109069 PRIMER_LEFT_14_SEQUENCE=GACGACTCAGTCTCTTGGTCTGT PRIMER_RIGHT_14_SEQUENCE=ACAACATGAATTCTGGCATCTTT PRIMER_LEFT_14=24,23 PRIMER_RIGHT_14=309,23 PRIMER_LEFT_14_TM=59.970 PRIMER_RIGHT_14_TM=59.891 PRIMER_LEFT_14_GC_PERCENT=52.174 PRIMER_RIGHT_14_GC_PERCENT=34.783 PRIMER_LEFT_14_SELF_ANY=7.00 PRIMER_RIGHT_14_SELF_ANY=6.00 PRIMER_LEFT_14_SELF_END=3.00 PRIMER_RIGHT_14_SELF_END=1.00 PRIMER_LEFT_14_MISPRIMING_SCORE=12.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_14_MISPRIMING_SCORE=11.00, reverse MER11A a consensus PRIMER_PAIR_14_MISPRIMING_SCORE=21.00, Tigger2 Autonomous DNA transposon PRIMER_LEFT_14_END_STABILITY=6.4000 PRIMER_RIGHT_14_END_STABILITY=7.0000 PRIMER_PAIR_14_COMPL_ANY=3.00 PRIMER_PAIR_14_COMPL_END=2.00 PRIMER_PRODUCT_SIZE_14=286 PRIMER_PAIR_PENALTY_15=0.1401 PRIMER_LEFT_15_PENALTY=0.133335 PRIMER_RIGHT_15_PENALTY=0.006805 PRIMER_LEFT_15_SEQUENCE=ATCTTTGGCCTTTGAATAGGTTC PRIMER_RIGHT_15_SEQUENCE=ATATTTAAGAGGGTTCTGCCTGC PRIMER_LEFT_15=2050,23 PRIMER_RIGHT_15=2864,23 PRIMER_LEFT_15_TM=59.867 PRIMER_RIGHT_15_TM=60.007 PRIMER_LEFT_15_GC_PERCENT=39.130 PRIMER_RIGHT_15_GC_PERCENT=43.478 PRIMER_LEFT_15_SELF_ANY=5.00 PRIMER_RIGHT_15_SELF_ANY=4.00 PRIMER_LEFT_15_SELF_END=2.00 PRIMER_RIGHT_15_SELF_END=2.00 PRIMER_LEFT_15_MISPRIMING_SCORE=11.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_15_MISPRIMING_SCORE=12.00, reverse MLT2D Interspersed repeat MLT2D - a consensus PRIMER_PAIR_15_MISPRIMING_SCORE=22.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_15_END_STABILITY=7.9000 PRIMER_RIGHT_15_END_STABILITY=9.7000 PRIMER_PAIR_15_COMPL_ANY=6.00 PRIMER_PAIR_15_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_15=815 PRIMER_PAIR_PENALTY_16=0.1411 PRIMER_LEFT_16_PENALTY=0.073619 PRIMER_RIGHT_16_PENALTY=0.067516 PRIMER_LEFT_16_SEQUENCE=AGAGCAAGCATAGATGGAAAGTG PRIMER_RIGHT_16_SEQUENCE=TTGATGCTCAAAGCACTTCTGTA PRIMER_LEFT_16=2602,23 PRIMER_RIGHT_16=3485,23 PRIMER_LEFT_16_TM=59.926 PRIMER_RIGHT_16_TM=60.068 PRIMER_LEFT_16_GC_PERCENT=43.478 PRIMER_RIGHT_16_GC_PERCENT=39.130 PRIMER_LEFT_16_SELF_ANY=4.00 PRIMER_RIGHT_16_SELF_ANY=6.00 PRIMER_LEFT_16_SELF_END=0.00 PRIMER_RIGHT_16_SELF_END=2.00 PRIMER_LEFT_16_MISPRIMING_SCORE=11.00, L1MA2 3'-end of L1 repeat (subfamily L1MA2) - a consensus sequence PRIMER_RIGHT_16_MISPRIMING_SCORE=11.00, MARINER1 Human mariner PRIMER_PAIR_16_MISPRIMING_SCORE=21.00, MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_16_END_STABILITY=6.7000 PRIMER_RIGHT_16_END_STABILITY=5.7000 PRIMER_PAIR_16_COMPL_ANY=5.00 PRIMER_PAIR_16_COMPL_END=3.00 PRIMER_PRODUCT_SIZE_16=884 PRIMER_PAIR_PENALTY_17=0.1422 PRIMER_LEFT_17_PENALTY=0.008837 PRIMER_RIGHT_17_PENALTY=0.133335 PRIMER_LEFT_17_SEQUENCE=GAGATGGAGTCTCACCACATAGG PRIMER_RIGHT_17_SEQUENCE=GAACCTATTCAAAGGCCAAAGAT PRIMER_LEFT_17=1598,23 PRIMER_RIGHT_17=2072,23 PRIMER_LEFT_17_TM=60.009 PRIMER_RIGHT_17_TM=59.867 PRIMER_LEFT_17_GC_PERCENT=52.174 PRIMER_RIGHT_17_GC_PERCENT=39.130 PRIMER_LEFT_17_SELF_ANY=5.00 PRIMER_RIGHT_17_SELF_ANY=5.00 PRIMER_LEFT_17_SELF_END=2.00 PRIMER_RIGHT_17_SELF_END=2.00 PRIMER_LEFT_17_MISPRIMING_SCORE=12.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_17_MISPRIMING_SCORE=12.00, MER21B a consensus PRIMER_PAIR_17_MISPRIMING_SCORE=23.00, reverse HSATI Human satellite I DNA HinfI fragment PRIMER_LEFT_17_END_STABILITY=7.1000 PRIMER_RIGHT_17_END_STABILITY=6.6000 PRIMER_PAIR_17_COMPL_ANY=5.00 PRIMER_PAIR_17_COMPL_END=1.00 PRIMER_PRODUCT_SIZE_17=475 PRIMER_PAIR_PENALTY_18=0.1450 PRIMER_LEFT_18_PENALTY=0.008837 PRIMER_RIGHT_18_PENALTY=0.136114 PRIMER_LEFT_18_SEQUENCE=GAGATGGAGTCTCACCACATAGG PRIMER_RIGHT_18_SEQUENCE=AATGCCGATAACAGAATTGAAAA PRIMER_LEFT_18=1598,23 PRIMER_RIGHT_18=1746,23 PRIMER_LEFT_18_TM=60.009 PRIMER_RIGHT_18_TM=59.864 PRIMER_LEFT_18_GC_PERCENT=52.174 PRIMER_RIGHT_18_GC_PERCENT=30.435 PRIMER_LEFT_18_SELF_ANY=5.00 PRIMER_RIGHT_18_SELF_ANY=6.00 PRIMER_LEFT_18_SELF_END=2.00 PRIMER_RIGHT_18_SELF_END=1.00 PRIMER_LEFT_18_MISPRIMING_SCORE=12.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_18_MISPRIMING_SCORE=12.00, MER7B Nonautonomous DNA transposon PRIMER_PAIR_18_MISPRIMING_SCORE=23.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_18_END_STABILITY=7.1000 PRIMER_RIGHT_18_END_STABILITY=7.3000 PRIMER_PAIR_18_COMPL_ANY=3.00 PRIMER_PAIR_18_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_18=149 PRIMER_PAIR_PENALTY_19=0.1450 PRIMER_LEFT_19_PENALTY=0.008837 PRIMER_RIGHT_19_PENALTY=0.136114 PRIMER_LEFT_19_SEQUENCE=GAGATGGAGTCTCACCACATAGG PRIMER_RIGHT_19_SEQUENCE=AAATGCCGATAACAGAATTGAAA PRIMER_LEFT_19=1598,23 PRIMER_RIGHT_19=1747,23 PRIMER_LEFT_19_TM=60.009 PRIMER_RIGHT_19_TM=59.864 PRIMER_LEFT_19_GC_PERCENT=52.174 PRIMER_RIGHT_19_GC_PERCENT=30.435 PRIMER_LEFT_19_SELF_ANY=5.00 PRIMER_RIGHT_19_SELF_ANY=6.00 PRIMER_LEFT_19_SELF_END=2.00 PRIMER_RIGHT_19_SELF_END=2.00 PRIMER_LEFT_19_MISPRIMING_SCORE=12.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_RIGHT_19_MISPRIMING_SCORE=12.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_PAIR_19_MISPRIMING_SCORE=24.00, reverse MLT1e (MLT1e subfamily) - consensus sequence PRIMER_LEFT_19_END_STABILITY=7.1000 PRIMER_RIGHT_19_END_STABILITY=7.3000 PRIMER_PAIR_19_COMPL_ANY=3.00 PRIMER_PAIR_19_COMPL_END=0.00 PRIMER_PRODUCT_SIZE_19=150 =