RNA-Seq Viewer

 

Download TCGA datasets

Please click agv files to download desired datasets and use iTune to sync the datasets to RNA-Seq Viewers APP.

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USER OWN DATA =>    user.agv


NGS V.1 RNA-Seq data

BLADDER UROTHELIAL CARCINOMA (57) =>    blca.agv

BREAST INVASIVE CARCINOMA (779) =>    brca.agv

HEAD AND NECK SQUAMOUS CELL CARCINOMA (264) =>    hnsc.agv

KIDNEY RENAL CLEAR CELL CARCINOMA (471) =>    kirc.agv

LIVER HEPATOCELLULAR CARCINOMA (18) =>    lihc.agv

LUNG ADENOCARCINOMA (126) =>    luad.agv

LUNG SQUAMOUS CELL CARCINOMA (225) =>    lusc.agv

STOMACH ADENOCARCINOMA (275) =>    stad.agv

UTERINE CORPUS ENDOMETRIAL CARCINOMA (334) =>    ucec.agv


miRNA-Seq data

BLADDER UROTHELIAL CARCINOMA (185) =>    miR_BLCA.agv

BREAST INVASIVE CARCINOMA (656) =>    miR_BRCA.agv

COLON ADENOCARCINOMA (234) =>    miR_COAD.agv

HEAD AND NECK SQUAMOUS CELL CARCINOMA (386) =>    miR_HNSC.agv

KIDNEY CHROMOPHOBE (66) =>    miR_KICH.agv

KIDNEY RENAL CLEAR CELL CARCINOMA (227) =>    miR_KIRC.agv

KIDNEY RENAL PAPILLARY CELL CARCINOMA (126)  =>    miR_KIRP.agv

LIVER HEPATOCELLULAR CARCINOMA (136) =>    miR_LIHC.agv

LUNG ADENOCARCINOMA (427) =>    miR_LUAD.agv

LUNG SQUAMOUS CELL CARCINOMA (326) =>    miR_LUSC.agv

PROSTATE ADENOCARCINOMA (232) =>    miR_PRAD.agv

RECTUM ADENOCARCINOMA (89) =>   miR_READ.agv

STOMACH ADENOCARCINOMA (253) =>    miR_STAD.agv

THYROID CARCINOMA (498) =>    miR_THCA.agv

UTERINE CORPUS ENDOMETRIAL CARCINOMA (375) =>    miR_UCEC.agv


NGS V.2 RNA-Seq data (summarized dataset only)

BLADDER UROTHELIAL CARCINOMA =>   BLCA_V2.agv

BREAST INVASIVE CARCINOMA =>    BRCA_V2.agv

Cervical Squamous Cell Carcinoma and Endo.. =>    CESC_V2.agv

Cholangiocarcinoma =>    CHOL_V2.agv

COLON ADENOCARCINOMA =>    COAD_V2.agv

Esophageal Carcinoma =>    ESCA_V2.agv

HEAD AND NECK SQUAMOUS CELL CARCINOMA =>    HNSC_V2.agv

KIDNEY CHROMOPHOBE =>    KICH_V2.agv

KIDNEY RENAL CLEAR CELL CARCINOMA =>    KIRC_V2.agv

KIDNEY RENAL PAPILLARY CELL CARCINOMA =>    KIRP_V2.agv

LIVER HEPATOCELLULAR CARCINOMA =>    LIHC_V2.agv

LUNG ADENOCARCINOMA =>    LUAD_V2.agv

LUNG SQUAMOUS CELL CARCINOMA =>    LUSC_V2.agv

Pancreatic Adenocarcinoma =>    PAAD_V2.agv

Pheochromocytoma and Paraganglioma =>    PCPG_V2.agv

PROSTATE ADENOCARCINOMA =>   PRAD_V2.agv

RECTUM ADENOCARCINOMA =>  READ_V2.agv

Sarcoma =>  SARC_V2.agv

STOMACH ADENOCARCINOMA =>   STAD_V2.agv

THYROID CARCINOMA =>    THCA_V2.agv

Thymoma =>    THYM_V2.agv

UTERINE CORPUS ENDOMETRIAL CARCINOMA =>    UCEC_V2.agv


NGS V.2 RNA-Seq data TUMOR TISSUES ONLY (summarized dataset only)

Adrenocortical Carcinoma =>    ACC_V2.agv

Lymphoid Neoplasm Diffuse Large B-cell Lymphoma =>    DLBC_V2.agv

Glioblastoma Multiforme =>    GBM_V2.agv

Acute Myeloid Leukemia =>    LAML_V2.agv

Brain Lower Grade Glioma =>    LGG_V2.agv

Mesothelioma =>    MESO_V2.agv

Ovarian Serous Cystadenocarcinoma =>   OV_V2.agv

Skin Cutaneous Melanoma =>  SKCM_V2.agv

Testicular Germ Cell Tumors =>  TGCT_V2.agv

Uterine Carcinosarcoma =>  UCS_V2.agv

Uveal Melanoma =>  UVM_V2.agv